| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445680
Identifier: 126445680
GI number: 126445680
Start: 423653
End: 425890
Strand: Direct
Name: 126445680
Synonym: BMA10247_A0477
Alternate gene names: NA
Gene position: 423653-425890 (Clockwise)
Preceding gene: 126446200
Following gene: 126446008
Centisome position: 18.01
GC content: 69.08
Gene sequence:
>2238_bases ATGACATCCACATTCCTGCGTCACGCGCCCGCCGCGCGTGAAGGCCACGCGCGCCGCCGGCGGCGCGCGATCACGCTTAC CGTTCCCGCGCTCGCCGCGGGCGCCTTTCACCTCGCGCCGGCCGTCGCGCAGACGAGCGAGGCCGTGCACGGCCACGGCA CGCTCGGCGCGTCCGGCGTAGCGAGCCGCGCCGAGACCGACGCGGCGAGCGCCAAATCGGACGGCGCGGTTCGCGAAGCG GCGAGCCGCACGGCAACCGGCGCCGCGCCGGACGCCACGACGCTGCCGACGATCGAAATCGTCGCGGCGCCCGAATCGAC GCCGCTCGTCGTCGTCACCGATCCGAAGACGCCGCGCCAGCCGCTGCCCGCGAGCGACGGCGCCGATTATCTGAAGACGA TTCCCGGCTTCGCGTCGATCCGCAGCGGCGGCACGAACGGCGACCCGGTGCTGCGCGGGATGTTCGGCTCGCGGCTGAAC ATTCTCGCGAACGGCATGCCGACGCTCGGTGCGTGTCCCGGCCGGATGGACGCGCCGACGTCGTACATCGCGTCCGAGAG CTACGACAAGGTGACGCTCGTCAAGGGGCCGCAGACCGTGCTGTACGGGCCGAGCGCATCGGCGGGCACGGTGCTGTTCG AGCGCGTGACGCCGCGCTTCAAGACGCCGGGCATGCGCTTTGACGGCAGCGTCGTCGGCGGCTCGTTCGGGCGCAACGAT CAGAACGTCGACGTGACGGCCGGCACGCCCGACTTCTACGGGCGCGTGAGCGCGAACCATGCGCACTCGCAGGACTACGA GGACGGCAACGGCCGCACGGTGCCGTCGCAATGGGACAAGTGGAACGCGGATGCGGCGCTCGGCTGGACGCCCGACGACA ACACGCGGCTCGAGCTGACGGCAGGCACGGGCGACGGCTACGCGCGCTATGCGGGCCGCGGAATGGACGGCGCGCATTTC CGGCGCGAGACGTTCGGTCTGAAGTTCGACAAGAAGCACATCGGCGACGTGCTCGATCGCATCGAGGCGCAGGTCTTCTA CAACGAAGCCGATCACGTGATGGACAACTACACGTTGCGGATGCCCGATCCGACGAGCAGCATGCCGATGCGCATGGCCT CCGAAGTGCGCCGCCGCACGCTCGGCGCGCGCGTCGCGGCGACGCTGCGCTTGACCGACGCGTTCAAGCTCGTGACGGGC GTCGATGCGCAGTCGAACCGCCTCGACTCGCGCTCGGCGATGGGGATGCAGAACTACGGCGACAAGCCGTGGAATCCGCA GGCGAACATGTGGAACGCGGGCGCGTTCGGCGAGCTGACCTGGTATGCGAGCGATGCGTCGCGCGTGATCGGCGGCGCGC GGATCGACTATGCGGCCGCGCGCGACAAGCGCGCGACGACGGGCGGCATGAAGATGAGCATGCGCAATCCGACGTTCGAC GATCTCCGCTCGCGCGTGCTGCCGAGCGGCTTCGTGCGCTACGAGCGTGATCTCGCGTCGCTGCCCGTCACGTGGTACGC GGGCATCGGCCATGCGCAGCGCTTCCCTGATTACTGGGAGCTGTTCTCCGCCAAGCGCGGCCCGAACGGTTCGATCAACG CGTTCTCCGCGATCAAGCCCGAGAAGACGACGCAGCTCGACATCGGCGCGCAGTACAAGAGCGACAAGCTCGACGCCTGG GTGTCCGCCTATGCGGGCTACGTGCAGGACTTCATCCTGTTCGACTATGCGACGGGCCCGATGGGACAGATCACGCGGGC GACGAACGTCAACGCGCAGATCATGGGCGGTGAGGTGGGCGCGTCGTGGCGTCCGCTCGCGCCGTGGCGCTTCGAAGGGT CGCTCGCGTATGCGTGGGGGCGCAACGTGCAAAGCGGTGCGCCGCTGCCGCAGATGCCGCCGCTCGAGGCACGCTTCGGC GTCGAGTACACTCGCGGGCCGTGGTCGGCGGGCGGGCTGTGGCGGGTCGTTGCGCCGCAGCATCGCTACGCGCTGAACGA GGGCAACGTCGTCGGCAAGGACTTCGGTCCGAGCGCCGGTTTCGGCGTGCTGTCGCTGCACGCGCAGTACAACGTGAGCA AGACGGTGCAGATCTCGGTCGGCGTCGACAACGTGCTCGACAAGACTTATGCGGAGCACCTGAACCTCGCGGGCAACGCC GGTTTCGGCTATCCGGCGAATCTGCCTGTCACCGAACCCGGCCGCACCGCGTGGGTTCGTTTGAGCACCAAGCTCTGA
Upstream 100 bases:
>100_bases GACAGACGCCTGAACGTCCGATTTCATTTCCGTTCATGCCGTCCCCGCCTCCGTTCGATCCGACGATCGCGCGGAAGGGG CGTCTTTCGAGTTGCGATTC
Downstream 100 bases:
>100_bases TCCTTTCCGCGTTCTTCCTCCCCCGCATCGCAGTGCAGCATCCGCGATGCGGGCGGCCAACCCGCTTGACTCCCCTGCTT GCGTCAATCGATTAGAGAGC
Product: TonB-dependent copper receptor
Products: NA
Alternate protein names: NB-Dependent Copper Receptor; NB Dependent Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Receptor Protein; Outer Membrane Protein C; Nb-Dependent Receptor; Outer Membrane Protein; Outer Membrane Protein OprC; Exported Heme Receptor Protein; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; NB-Dependent Siderophore Receptor Family Protein; IMP Dehydrogenase/GMP Reductase; NB-Dependent Haemoglobin/Transferrin/Lactoferrin Receptor; NB-Dependent Receptor Plug Domain-Containing; Haem/Haemoglobin Uptake Outer Membrane Receptor PhuR; Ferrienterochelin/Colicin Outer Membrane Receptor; NB-Dependent Outer Membrane Heme Receptor; Outer Membrane Protein OprC Complement; Iron Complex Outermembrane Recepter Protein; Outer Membrane Heme Receptor; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; Outer Membrane nB-Dependent Heme Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MTSTFLRHAPAAREGHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRAETDAASAKSDGAVREA ASRTATGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLN ILANGMPTLGACPGRMDAPTSYIASESYDKVTLVKGPQTVLYGPSASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDGAHF RRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTG VDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKLDAW VSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFG VEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKTYAEHLNLAGNA GFGYPANLPVTEPGRTAWVRLSTKL
Sequences:
>Translated_745_residues MTSTFLRHAPAAREGHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRAETDAASAKSDGAVREA ASRTATGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLN ILANGMPTLGACPGRMDAPTSYIASESYDKVTLVKGPQTVLYGPSASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDGAHF RRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTG VDAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKLDAW VSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFG VEYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKTYAEHLNLAGNA GFGYPANLPVTEPGRTAWVRLSTKL >Mature_744_residues TSTFLRHAPAAREGHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGVASRAETDAASAKSDGAVREAA SRTATGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQPLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNI LANGMPTLGACPGRMDAPTSYIASESYDKVTLVKGPQTVLYGPSASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRNDQ NVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELTAGTGDGYARYAGRGMDGAHFR RETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLRMPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGV DAQSNRLDSRSAMGMQNYGDKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFDD LRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKPEKTTQLDIGAQYKSDKLDAWV SAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVGASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGV EYTRGPWSAGGLWRVVAPQHRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKTYAEHLNLAGNAG FGYPANLPVTEPGRTAWVRLSTKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80219; Mature: 80087
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTFLRHAPAAREGHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGV CCCCHHHCCCCCHHHHHHHHCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC ASRAETDAASAKSDGAVREAASRTATGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQ CHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC PLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNILANGMPTLGACPGRMDAPT CCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC SYIASESYDKVTLVKGPQTVLYGPSASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND HHHHCCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCC QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELT CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEE AGTGDGYARYAGRGMDGAHFRRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLR ECCCCCHHHHCCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHEECCHHHHHCCCEEE MPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGVDAQSNRLDSRSAMGMQNYG CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCCHHCCCCHHHHCCHHHCC DKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD CCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHCCCCCCCCCEEEEECCCCHH DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKP HHHHHHCCCHHHHHHHHHHHCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCEEECCCC EKTTQLDIGAQYKSDKLDAWVSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCEEEECCCCC ASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGVEYTRGPWSAGGLWRVVAPQ CCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEEECCC HRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKTYAEHLNLAGNA HHEECCCCCEECCCCCCCCCCEEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCCC GFGYPANLPVTEPGRTAWVRLSTKL CCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TSTFLRHAPAAREGHARRRRRAITLTVPALAAGAFHLAPAVAQTSEAVHGHGTLGASGV CCCHHHCCCCCHHHHHHHHCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC ASRAETDAASAKSDGAVREAASRTATGAAPDATTLPTIEIVAAPESTPLVVVTDPKTPRQ CHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC PLPASDGADYLKTIPGFASIRSGGTNGDPVLRGMFGSRLNILANGMPTLGACPGRMDAPT CCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC SYIASESYDKVTLVKGPQTVLYGPSASAGTVLFERVTPRFKTPGMRFDGSVVGGSFGRND HHHHCCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCC QNVDVTAGTPDFYGRVSANHAHSQDYEDGNGRTVPSQWDKWNADAALGWTPDDNTRLELT CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEE AGTGDGYARYAGRGMDGAHFRRETFGLKFDKKHIGDVLDRIEAQVFYNEADHVMDNYTLR ECCCCCHHHHCCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHEECCHHHHHCCCEEE MPDPTSSMPMRMASEVRRRTLGARVAATLRLTDAFKLVTGVDAQSNRLDSRSAMGMQNYG CCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCCHHCCCCHHHHCCHHHCC DKPWNPQANMWNAGAFGELTWYASDASRVIGGARIDYAAARDKRATTGGMKMSMRNPTFD CCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCEEEHHHHCCCCCCCCCEEEEECCCCHH DLRSRVLPSGFVRYERDLASLPVTWYAGIGHAQRFPDYWELFSAKRGPNGSINAFSAIKP HHHHHHCCCHHHHHHHHHHHCCEEEEECCCCHHHCCHHHHHHHCCCCCCCCCCEEECCCC EKTTQLDIGAQYKSDKLDAWVSAYAGYVQDFILFDYATGPMGQITRATNVNAQIMGGEVG CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCEEEECCCCC ASWRPLAPWRFEGSLAYAWGRNVQSGAPLPQMPPLEARFGVEYTRGPWSAGGLWRVVAPQ CCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCHHCCCEECCCCCCCCCEEEEECCC HRYALNEGNVVGKDFGPSAGFGVLSLHAQYNVSKTVQISVGVDNVLDKTYAEHLNLAGNA HHEECCCCCEECCCCCCCCCCEEEEEEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCCC GFGYPANLPVTEPGRTAWVRLSTKL CCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA