| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 226830781
Identifier: 226830781
GI number: 226830781
Start: 95832
End: 96527
Strand: Direct
Name: 226830781
Synonym: BURPS1106A_0100
Alternate gene names: NA
Gene position: 95832-96527 (Clockwise)
Preceding gene: 126453319
Following gene: 126454640
Centisome position: 2.4
GC content: 59.77
Gene sequence:
>696_bases ATGAAAACGCTGTCCGTGAACGATCTCAGATTTCAAGTGCGCCGCAGCGCCGCGCGGCGATCGCTTGAAATCACCGTGGA TCGTGACGGCGATCTCATCCTCTCAGCCCCACCCGAGGTCGATGAGTCGGCGCTACGTGACTTCGTGCTTCGCAAGCGCA TGTGGGTCTACAAACAGCTCGCGCGCAGGGAGGCGCTCAGCCGCGAGGTGCGACGCAAAGAATTCACAGATGGCGAGGGA TTTCTCTACCTCGGCCGCAGTTATCGCTTGCGTCTGGTGCCGGAACTCGACGTCGCAGTGAAGCTGCAGAGCGGACGATT CTTGATGCCTAAGCGGCTTATCGCGGAAGGCAGGCAGCATCTGATCCGCTGGTATTGCGATCGAGGGACACGGTGGTTGT CGGATAAGGTAGTGGAGTATGCAGCGCGGATGGAGGTGAATCCAGCCAGCGTCCGCGTTCAGGACCTCGGTTACCGGTGG GGCTCGTGCGGCAAGGGGGCACGACTTTACTTTCACTGGAAGACGATCCTCCTCCCTGCGCGCATCGCCGAGTACGTCGT CGTGCATGAAATGGCCCATCTGCACGAACCCCACCATACACCGGAGTTCTGGCGGCGAGTCGAACGAACGATGCCGGATT TCGAGCGGCGACGAACTTGGCTTGCCGAGCACGGTGTTGAAATTGAGGGGATTTGA
Upstream 100 bases:
>100_bases TATTGATGCGCTCGCGGTTGTTACCGGCGCCGCAGATCGAAGCGTTGGTCGACAAGCTTATGGAACTCGCCCGCGCTAAC CACGCCCAGTTGGTAAGTGT
Downstream 100 bases:
>100_bases CTGTCACGCGTATAGAACGCACAAGGTAATCCACGAATAGTCGACCTCGGGGCGAGCTGATGCCTGACGCTACCCCTATA AAGCGCTTCGTGCTATGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKTLSVNDLRFQVRRSAARRSLEITVDRDGDLILSAPPEVDESALRDFVLRKRMWVYKQLARREALSREVRRKEFTDGEG FLYLGRSYRLRLVPELDVAVKLQSGRFLMPKRLIAEGRQHLIRWYCDRGTRWLSDKVVEYAARMEVNPASVRVQDLGYRW GSCGKGARLYFHWKTILLPARIAEYVVVHEMAHLHEPHHTPEFWRRVERTMPDFERRRTWLAEHGVEIEGI
Sequences:
>Translated_231_residues MKTLSVNDLRFQVRRSAARRSLEITVDRDGDLILSAPPEVDESALRDFVLRKRMWVYKQLARREALSREVRRKEFTDGEG FLYLGRSYRLRLVPELDVAVKLQSGRFLMPKRLIAEGRQHLIRWYCDRGTRWLSDKVVEYAARMEVNPASVRVQDLGYRW GSCGKGARLYFHWKTILLPARIAEYVVVHEMAHLHEPHHTPEFWRRVERTMPDFERRRTWLAEHGVEIEGI >Mature_231_residues MKTLSVNDLRFQVRRSAARRSLEITVDRDGDLILSAPPEVDESALRDFVLRKRMWVYKQLARREALSREVRRKEFTDGEG FLYLGRSYRLRLVPELDVAVKLQSGRFLMPKRLIAEGRQHLIRWYCDRGTRWLSDKVVEYAARMEVNPASVRVQDLGYRW GSCGKGARLYFHWKTILLPARIAEYVVVHEMAHLHEPHHTPEFWRRVERTMPDFERRRTWLAEHGVEIEGI
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27428; Mature: 27428
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSVNDLRFQVRRSAARRSLEITVDRDGDLILSAPPEVDESALRDFVLRKRMWVYKQL CCCCCCHHHHHHHHHHHHHCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH ARREALSREVRRKEFTDGEGFLYLGRSYRLRLVPELDVAVKLQSGRFLMPKRLIAEGRQH HHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCEEEEECCCCEECHHHHHHHHHHH LIRWYCDRGTRWLSDKVVEYAARMEVNPASVRVQDLGYRWGSCGKGARLYFHWKTILLPA HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCEEEEEHHHHHHHH RIAEYVVVHEMAHLHEPHHTPEFWRRVERTMPDFERRRTWLAEHGVEIEGI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEECCC >Mature Secondary Structure MKTLSVNDLRFQVRRSAARRSLEITVDRDGDLILSAPPEVDESALRDFVLRKRMWVYKQL CCCCCCHHHHHHHHHHHHHCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH ARREALSREVRRKEFTDGEGFLYLGRSYRLRLVPELDVAVKLQSGRFLMPKRLIAEGRQH HHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCEEEEECCCCEECHHHHHHHHHHH LIRWYCDRGTRWLSDKVVEYAARMEVNPASVRVQDLGYRWGSCGKGARLYFHWKTILLPA HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCEEEEEHHHHHHHH RIAEYVVVHEMAHLHEPHHTPEFWRRVERTMPDFERRRTWLAEHGVEIEGI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA