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The map label for this gene is fimA [H]

Identifier: 226830780

GI number: 226830780

Start: 805278

End: 805796

Strand: Direct

Name: fimA [H]

Synonym: BURPS1106A_0820

Alternate gene names: 226830780

Gene position: 805278-805796 (Clockwise)

Preceding gene: 126453641

Following gene: 126451737

Centisome position: 20.19

GC content: 72.25

Gene sequence:

>519_bases
TTGCGCGCTCGCGGTTTCACGCTGATCGAATTGATGATCGTGCTCGCGATCGTCGGCGTCGTCGCCGCGTACGCGATTCC
CGCCTATCAGGATTATCTCGCGCGCAGCCGGGTCGGCGAGGGGCTCGCGCTCGCCGCGTCCGCGCGGCTCGCGGTTGCCG
AGAACGCGGCGAGCGGCAATGGATTCTCGGGCGGCTACGTGTCGCCGCCCGCCACGCGCAACGTCGATTCGATTCGGGTC
GACGACGACTCCGGGCAGATCGTCGTCGCGTTCACGACGCGCGTGGCGGCGGCGGGCGCGAATACGCTCGTGCTGGTGCC
GTCCGCGCCGGATCAGGCGGATACGCCGACGGCGCGTGTCGCGTTGTCGAAGGGCGCCGTCCAGGCGGGGGCGATCACGT
GGGAATGCTTTGCCGACGGCAAGGCGTCGTCGTCGCTGCCCGCGCCGGGCGCCGGCCCGCTGCCGACCGATGCGCCGACG
CTGGCCGGCAAGCTGGCGCCCCCCGAGTGCCGCGCGTGA

Upstream 100 bases:

>100_bases
CGATGTTCTTTCCGTTTTACCGCCGCTATCGCTGCTTGCGCCCCGGCGCATGGGCATCGCGCGCGGTCTGCGCCGCGTGT
GGCGCGTGTCGCGGCGCCGG

Downstream 100 bases:

>100_bases
TGGCCGCCGGCGGCCGCGGCGAAGCCGCGCAAGCGCACGATGACGCGATGGAGCGATCGCCGGGAATGGGTCTTGCGCGG
CATGGCGGCCGTCCGGCGGC

Product: putative type IV pilin protein PilA

Products: NA

Alternate protein names: Pilin; Serogroup C1 [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRARGFTLIELMIVLAIVGVVAAYAIPAYQDYLARSRVGEGLALAASARLAVAENAASGNGFSGGYVSPPATRNVDSIRV
DDDSGQIVVAFTTRVAAAGANTLVLVPSAPDQADTPTARVALSKGAVQAGAITWECFADGKASSSLPAPGAGPLPTDAPT
LAGKLAPPECRA

Sequences:

>Translated_172_residues
MRARGFTLIELMIVLAIVGVVAAYAIPAYQDYLARSRVGEGLALAASARLAVAENAASGNGFSGGYVSPPATRNVDSIRV
DDDSGQIVVAFTTRVAAAGANTLVLVPSAPDQADTPTARVALSKGAVQAGAITWECFADGKASSSLPAPGAGPLPTDAPT
LAGKLAPPECRA
>Mature_172_residues
MRARGFTLIELMIVLAIVGVVAAYAIPAYQDYLARSRVGEGLALAASARLAVAENAASGNGFSGGYVSPPATRNVDSIRV
DDDSGQIVVAFTTRVAAAGANTLVLVPSAPDQADTPTARVALSKGAVQAGAITWECFADGKASSSLPAPGAGPLPTDAPT
LAGKLAPPECRA

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 17264; Mature: 17264

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARGFTLIELMIVLAIVGVVAAYAIPAYQDYLARSRVGEGLALAASARLAVAENAASGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCEEEEECCCCCCC
GFSGGYVSPPATRNVDSIRVDDDSGQIVVAFTTRVAAAGANTLVLVPSAPDQADTPTARV
CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHCCCCEEEEEECCCCCCCCCCEEE
ALSKGAVQAGAITWECFADGKASSSLPAPGAGPLPTDAPTLAGKLAPPECRA
EECCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MRARGFTLIELMIVLAIVGVVAAYAIPAYQDYLARSRVGEGLALAASARLAVAENAASGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCEEEEECCCCCCC
GFSGGYVSPPATRNVDSIRVDDDSGQIVVAFTTRVAAAGANTLVLVPSAPDQADTPTARV
CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHCCCCEEEEEECCCCCCCCCCEEE
ALSKGAVQAGAITWECFADGKASSSLPAPGAGPLPTDAPTLAGKLAPPECRA
EECCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675419 [H]