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The map label for this gene is yehY [H]

Identifier: 126455455

GI number: 126455455

Start: 1957113

End: 1958333

Strand: Reverse

Name: yehY [H]

Synonym: BURPS1106A_1994

Alternate gene names: 126455455

Gene position: 1958333-1957113 (Counterclockwise)

Preceding gene: 126452444

Following gene: 126452251

Centisome position: 49.1

GC content: 75.76

Gene sequence:

>1221_bases
ATGACGCCGCGCACGGCGGGCGGCGCGGCCGCGCCCGCTCCCGCGCCGCGCCCGCGCGCGATGCCCGCGTGGGCCGCGCG
CGTCGACAAGGTCGGCGTGCTGATCGCCGCGCTCGTCGCGTACGCGGCGTTCGTGCTGCCGTTCGTCACGCTGCGCGCGA
ACCGGATCGCGGCGGGCGCGGAGCTCGCGCCCGCCGCGGTGTTTCCGGCGCTCCACGCGTACGCGCTCGACGCGCTGTGG
GCGGCGGGCGCGCTGTTCGCGCTCGTGCACAGCCGCGCGGCATGGCGCGCGGCCGTCGGCGTCGGGCTCGTGTTCGCGCT
GGGCGTGGCGATCGGCGCGGCGCCCGCGCATCTCGTCACGCCGGATACGCCGCTCGCGCGCGTGTCGCCCGCGGCGGGCG
CGTGGCTGCTGCTGTTCGCGTTCGCGGTGCTGATCGCCGACGCGCTCGCCCGGATCGCGCTCGCGCCCGCGATGCGCCTC
GTCGCGCTCGCCGCGGCGAGCGCCGCGCTCGCGGCATTCATTCACGGCGGCTTCTGGGACGGGCTGTCGGTGATGCAGGA
ATACGCGGTGCGCGCCGATACGTTCCGCAACGAGGCGATCCGGCATCTCGCGCTCGTCGCCGGCTCGGTGGCGGCGGCCG
TCGCGCTCGGCGTGCCGCTCGGCATCGGCTGCACGCGCTCGGCCGCGCTGCGCGGCGCGTTGCTGCCGCTGCTGAACGTC
GTGCAGACGATCCCGAGCATCGCGCTGTACGGCCTGCTGATGGCGCCGCTCGCGATCCTCGCCGCGCGCGTGCCGCTCGC
CGCCCGCCTCGGCGTGAGCGGCATCGGCGTCGCGCCCGCGCTGATCGCCCTGTTCCTGTATGCGCTGCTGCCGATCGTGT
CGAGCGTCGTCGTCGGATTCGCGCAGGTGCCCGCCGCCGTCGTCGAGGCCGCGCTCGCGATGGGGATGACGGGCCGCGAG
CGGCTCGTCGCGATCGAGCTGCCGCTCGCGCTGCCCGTCGTGCTTTCCGGCGTGCGCATCGTGCTCGTGCAGAACATCGG
CCTCACGGCCGTCGCCGCGCTGATCGGCGGCGGCGGCTTCGGCACGTTCATCTTCCAGGGGATCGGCCAGTCGGCGACCG
ATCTCGTGCTGCTCGGCGCGCTGCCGACGATCGCGCTCGCGCTCGTCACCGCCGTGCTGTTCGAGGCCGCGACCGACCTA
GCGAAAGGAGCGCGCCGATGA

Upstream 100 bases:

>100_bases
ACCTGAAGACGCTGCAAGCGCTCAACGCGCGAATCCAGATCAACGGCGAGCCGGCCGCGGGCGTCGCGGCGAGCTATCTG
AAAGCGAAGGGCTTCGTCAA

Downstream 100 bases:

>100_bases
TCGAGATCGAACGCGTGAGCCGGCTGTTCGGCGACCTCGCCGCGGTCGACGACGTGTCGCTCGCGGTCGCGCGCGGCACG
GTGACGGCGCTCGTCGGCGC

Product: amine ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTPRTAGGAAAPAPAPRPRAMPAWAARVDKVGVLIAALVAYAAFVLPFVTLRANRIAAGAELAPAAVFPALHAYALDALW
AAGALFALVHSRAAWRAAVGVGLVFALGVAIGAAPAHLVTPDTPLARVSPAAGAWLLLFAFAVLIADALARIALAPAMRL
VALAAASAALAAFIHGGFWDGLSVMQEYAVRADTFRNEAIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNV
VQTIPSIALYGLLMAPLAILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTGRE
RLVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALPTIALALVTAVLFEAATDL
AKGARR

Sequences:

>Translated_406_residues
MTPRTAGGAAAPAPAPRPRAMPAWAARVDKVGVLIAALVAYAAFVLPFVTLRANRIAAGAELAPAAVFPALHAYALDALW
AAGALFALVHSRAAWRAAVGVGLVFALGVAIGAAPAHLVTPDTPLARVSPAAGAWLLLFAFAVLIADALARIALAPAMRL
VALAAASAALAAFIHGGFWDGLSVMQEYAVRADTFRNEAIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNV
VQTIPSIALYGLLMAPLAILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTGRE
RLVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALPTIALALVTAVLFEAATDL
AKGARR
>Mature_405_residues
TPRTAGGAAAPAPAPRPRAMPAWAARVDKVGVLIAALVAYAAFVLPFVTLRANRIAAGAELAPAAVFPALHAYALDALWA
AGALFALVHSRAAWRAAVGVGLVFALGVAIGAAPAHLVTPDTPLARVSPAAGAWLLLFAFAVLIADALARIALAPAMRLV
ALAAASAALAAFIHGGFWDGLSVMQEYAVRADTFRNEAIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNVV
QTIPSIALYGLLMAPLAILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGFAQVPAAVVEAALAMGMTGRER
LVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGFGTFIFQGIGQSATDLVLLGALPTIALALVTAVLFEAATDLA
KGARR

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=295, Percent_Identity=46.4406779661017, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1788449, Length=207, Percent_Identity=36.7149758454106, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789033, Length=196, Percent_Identity=29.5918367346939, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40773; Mature: 40642

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRTAGGAAAPAPAPRPRAMPAWAARVDKVGVLIAALVAYAAFVLPFVTLRANRIAAGA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELAPAAVFPALHAYALDALWAAGALFALVHSRAAWRAAVGVGLVFALGVAIGAAPAHLVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDTPLARVSPAAGAWLLLFAFAVLIADALARIALAPAMRLVALAAASAALAAFIHGGFWD
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
GLSVMQEYAVRADTFRNEAIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VQTIPSIALYGLLMAPLAILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGF
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQVPAAVVEAALAMGMTGRERLVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGF
HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCHH
GTFIFQGIGQSATDLVLLGALPTIALALVTAVLFEAATDLAKGARR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPRTAGGAAAPAPAPRPRAMPAWAARVDKVGVLIAALVAYAAFVLPFVTLRANRIAAGA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELAPAAVFPALHAYALDALWAAGALFALVHSRAAWRAAVGVGLVFALGVAIGAAPAHLVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDTPLARVSPAAGAWLLLFAFAVLIADALARIALAPAMRLVALAAASAALAAFIHGGFWD
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
GLSVMQEYAVRADTFRNEAIRHLALVAGSVAAAVALGVPLGIGCTRSAALRGALLPLLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VQTIPSIALYGLLMAPLAILAARVPLAARLGVSGIGVAPALIALFLYALLPIVSSVVVGF
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQVPAAVVEAALAMGMTGRERLVAIELPLALPVVLSGVRIVLVQNIGLTAVAALIGGGGF
HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCHH
GTFIFQGIGQSATDLVLLGALPTIALALVTAVLFEAATDLAKGARR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]