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The map label for this gene is trpH [H]

Identifier: 126455438

GI number: 126455438

Start: 2585402

End: 2586232

Strand: Reverse

Name: trpH [H]

Synonym: BURPS1106A_2624

Alternate gene names: 126455438

Gene position: 2586232-2585402 (Counterclockwise)

Preceding gene: 126451588

Following gene: 126453661

Centisome position: 64.84

GC content: 69.92

Gene sequence:

>831_bases
ATGAACGCCGATCTCCACTGCCATTCGAACGTTTCCGACGGTCAGCTCGCGCCCGCCGACGTCGCGCGCCGCGCGCACGC
GGGCGGCGTCACGCTGTGGGCGCTGACCGATCACGACGAGGTCGGCGGCCAGCGCGCCGCGCGCGAAGCCGCCGAGGCGC
TCGGCATGCGCTATCTGCACGGCGTCGAGATTTCCGTGACCTGGGCGTCGCGCACCGTGCACATCGTCGGCCTGAACATC
GATCCGCGGAACCCCGCGCTCATCGACGGGCTTCACCGCACCCGCAACGGCCGCGCGGCGCGCGCGGTCGCGATCGGCGA
CGCGCTCGCCGCGCTCGGCATCGAAGCCGCCTACGAGGGCGCGCTCGCCTATGTGTCGAATCCCGATCTGATCTCGCGCA
CGCACTTCGCGCGCTTTCTCGTCGACAAGGGCTACGCGGCGTCGATGTCCGACGTGTTCGACCGCTATCTCGGCGACGGC
AAGCCGGGCTACGTCGCGCACCGCTGGGCGAAACTGTCGGACGCCGTCGCATGGATTCGGCAGGCGGGCGGCGAAGCGGT
CGTCGCGCATCCGGGCCGCTATGCGTATACGAGCGTCGAGTTCGACGCGTTCTTCGGCGAGTTCATCGAGCTGGGCGGCG
TCGCGATCGAGGTGGTGACGGGCAGCCATACGCCCGACCAGTACCGTGAATACGCGGACGTCGCGCGGCGCTTCGGCTTC
GAGGCATCGCGCGGCTCCGATTTCCACGCGCCGGGAGAAGGGCGTACCGAATTCGGCAGCCTGCCGCCGCTGCCGTCCGA
TCTCAAACCCGTCTGGGAGCGCTGGCTGTAG

Upstream 100 bases:

>100_bases
ACGCGCGGGCGCGCCGTCTCGGCCGTCTCCGCCGGGCGGCGGCCTGCGTGGCGAATTTGCGCGTTGCAGTAGAATGATCG
CCTAGCCTCCGATGCCCACG

Downstream 100 bases:

>100_bases
CGGCGTTTGCCGGCGGCACCTCCGGCGCGCGGGCTCGCACGCGCCGATCCATACCTTTGTCCCCATGTCCCAATTCTTCA
GGATTCACCCGGATGATCCG

Product: putative phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNADLHCHSNVSDGQLAPADVARRAHAGGVTLWALTDHDEVGGQRAAREAAEALGMRYLHGVEISVTWASRTVHIVGLNI
DPRNPALIDGLHRTRNGRAARAVAIGDALAALGIEAAYEGALAYVSNPDLISRTHFARFLVDKGYAASMSDVFDRYLGDG
KPGYVAHRWAKLSDAVAWIRQAGGEAVVAHPGRYAYTSVEFDAFFGEFIELGGVAIEVVTGSHTPDQYREYADVARRFGF
EASRGSDFHAPGEGRTEFGSLPPLPSDLKPVWERWL

Sequences:

>Translated_276_residues
MNADLHCHSNVSDGQLAPADVARRAHAGGVTLWALTDHDEVGGQRAAREAAEALGMRYLHGVEISVTWASRTVHIVGLNI
DPRNPALIDGLHRTRNGRAARAVAIGDALAALGIEAAYEGALAYVSNPDLISRTHFARFLVDKGYAASMSDVFDRYLGDG
KPGYVAHRWAKLSDAVAWIRQAGGEAVVAHPGRYAYTSVEFDAFFGEFIELGGVAIEVVTGSHTPDQYREYADVARRFGF
EASRGSDFHAPGEGRTEFGSLPPLPSDLKPVWERWL
>Mature_276_residues
MNADLHCHSNVSDGQLAPADVARRAHAGGVTLWALTDHDEVGGQRAAREAAEALGMRYLHGVEISVTWASRTVHIVGLNI
DPRNPALIDGLHRTRNGRAARAVAIGDALAALGIEAAYEGALAYVSNPDLISRTHFARFLVDKGYAASMSDVFDRYLGDG
KPGYVAHRWAKLSDAVAWIRQAGGEAVVAHPGRYAYTSVEFDAFFGEFIELGGVAIEVVTGSHTPDQYREYADVARRFGF
EASRGSDFHAPGEGRTEFGSLPPLPSDLKPVWERWL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=39.051094890511, Blast_Score=184, Evalue=7e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 29895; Mature: 29895

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADLHCHSNVSDGQLAPADVARRAHAGGVTLWALTDHDEVGGQRAAREAAEALGMRYLH
CCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHHHC
GVEISVTWASRTVHIVGLNIDPRNPALIDGLHRTRNGRAARAVAIGDALAALGIEAAYEG
CEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCC
ALAYVSNPDLISRTHFARFLVDKGYAASMSDVFDRYLGDGKPGYVAHRWAKLSDAVAWIR
EEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QAGGEAVVAHPGRYAYTSVEFDAFFGEFIELGGVAIEVVTGSHTPDQYREYADVARRFGF
HCCCCEEEECCCCEEEEEEEHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCC
EASRGSDFHAPGEGRTEFGSLPPLPSDLKPVWERWL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNADLHCHSNVSDGQLAPADVARRAHAGGVTLWALTDHDEVGGQRAAREAAEALGMRYLH
CCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHCHHHHHHHHHHHHHHHHHC
GVEISVTWASRTVHIVGLNIDPRNPALIDGLHRTRNGRAARAVAIGDALAALGIEAAYEG
CEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCC
ALAYVSNPDLISRTHFARFLVDKGYAASMSDVFDRYLGDGKPGYVAHRWAKLSDAVAWIR
EEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QAGGEAVVAHPGRYAYTSVEFDAFFGEFIELGGVAIEVVTGSHTPDQYREYADVARRFGF
HCCCCEEEECCCCEEEEEEEHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCC
EASRGSDFHAPGEGRTEFGSLPPLPSDLKPVWERWL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]