| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is glk [H]
Identifier: 126455435
GI number: 126455435
Start: 2984428
End: 2986353
Strand: Direct
Name: glk [H]
Synonym: BURPS1106A_3055
Alternate gene names: 126455435
Gene position: 2984428-2986353 (Clockwise)
Preceding gene: 126455127
Following gene: 126453748
Centisome position: 74.83
GC content: 68.85
Gene sequence:
>1926_bases ATGTCTACTGGTGCGCAAACTAAGGCCGCCGCGGCGAGCCAGCACGCGGACGGGCCGCGCCTATTGGCCGACGTCGGCGG CACGAACGCGCGCTTCGCGCTCGAGACGGGCCCGGGAGAAATCACGCAGATCCGCGTGTACCCGGGCGCCGAGTATCCGA CGCTCACCGACGCGATCCGCAAGTACCTGAAGGACGCGAAGATCGGCCGCGTGAATCACGCGGCGATCGCGATCGCGAAC CCCGTCGACGGCGATCAGGTCCGGATGACGAATCACAACTGGAGCTTCTCGATCGAGGCGACGCGCCGCGCGCTCGGCTT CGATACGCTGCTCGTCGTCAACGATTTCACCGCGCTCGCGATGGCGCTGCCCGGCCTGACCGATGCGCAGCGCGTACAGA TCGGCGGCGGCACGCGCCGGCAGAACAGCGTGATCGGCCTGATGGGGCCGGGCACGGGGCTCGGCGTGTCGGGGCTCATT CCCGCCGACGACCGCTGGATCGCGCTCGGCAGCGAAGGCGGCCACGCGACGTTCGCGCCGATGGACGAGCGCGAGGATCT CGTGCTGCAATACGCGCGCCGCAAGTATCCTCACGTGTCGTTCGAGCGCGTGTGCGCGGGCCCGGGCATGGAGATCATCT ATCGCGCGCTCGCCGCGCGCGACAAGAAGCGCATCGCCGCGAACGTCGACACGGCCGACATCGTCGAGCGCGCGCACGCG GGCGATGCGCTCGCGCTCGAGGCGGTCGAGTGCTTCTGCGCGATTCTCGGCACGTTCGCCGGCAACCTCGCGGTCACGCT CGGCGCGTTGGGCGGCATCTATATCGGCGGCGGCGTCGTGCCGAAGCTCGGCGAGCTGTTCATGCGCTCGCCGTTTCGCG CGCGCTTCGAGGCGAAGGGCCGCTTCGAGGCGTATCTCGCGAACATCCCGACCTACCTGATCACCGCGGAATACCCGGCG TTTCTCGGCGTATCGGCGATCCTCGCCGAGCAACTGTCGAACCGCACGGGCGGCGCGTCGTCGGCCGTGTTCGAGCGCAT CCGCCAGATGCGCGACGCGTTGACGCCCGCCGAGCGGCGCGTCGCCGATCTCGCGCTCAACCATCCGCGCTCGATCATCA ACGATCCGATCGTCGACATCGCGCGCAAGGCCGACGTGAGCCAGCCCACCGTGATCCGCTTCTGCCGCTCGCTCGGCTGC CAGGGGCTGTCGGACTTCAAGCTGAAGCTCGCGACGGGCCTCACCGGCACGATCCCGATGAGCCACAGCCAGGTGCATCT GGGCGACACCGCGACCGATTTCGGCGCGAAGGTGCTCGACAACACGGTATCGGCGATCCTTCAGTTGCGCGAGCATCTGA ACTTCGAGCACGTCGAGCAGGCGATCGACATCCTGAACAACGCGCGGCGCATCGAGTTCTACGGCCTGGGCAATTCGAAC ATCGTCGCGCAGGACGCGCACTACAAGTTCTTCCGCTTCGGGATTCCGACGATCGCGTACGGCGACCTGTACATGCAGGC GGCGTCGGCCGCGCTCCTCGGCAAGGGCGACGTGATCGTCGCGGTGTCGAAGTCGGGGCGCGCGCCGGAGCTGTTGCGCG TGCTCGACGTCGCGATGCAGGCGGGCGCGAAGGTGATCGCGATCACGTCGAGCAACACGCCGCTCGCCAAGCGCGCGACG GTCGCGCTCGAGACCGATCACATCGAGATGCGCGAGTCGCAGTTGTCGATGATCTCGCGGATCCTGCATCTCGTGATGAT CGACATCCTCGCGGTCGGCGTCGCGATCCGCCGCGCCGCGCCGAACGCGGAGCTCGCGGAGGCGATGGCGCGCGCGAAGG CGCGCGCGGGCGCGAGCGCGGGCGACGAGGCCGCCGACGTGCTCGACTGGCTGAGCCACGGCGCGGCGCCCGCGGCGAAG GACTGA
Upstream 100 bases:
>100_bases ATCGCGGGAAGCCGCAAGCGCGCGGTGCTCGAGGCGGCCGCGGCCGCGCCGCAGAAGAACGCGATTTCGCAACTGGCCAA CGACAAGGGGACGAAGCTCG
Downstream 100 bases:
>100_bases CGCACGCGGCGCACGCGCACCGTCGCGCACCGGCGCGCGACGCGACGCGCAGCCATGATGCCGGAGCCTTCGCGCTCCGG CATCTTTCTTCGGATCATCG
Product: bifunctional glucokinase/RpiR family transcriptional regulator
Products: NA
Alternate protein names: Glucokinase; Glucose kinase; Putative HTH-type transcriptional regulator [H]
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSTGAQTKAAAASQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGAEYPTLTDAIRKYLKDAKIGRVNHAAIAIAN PVDGDQVRMTNHNWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRVQIGGGTRRQNSVIGLMGPGTGLGVSGLI PADDRWIALGSEGGHATFAPMDEREDLVLQYARRKYPHVSFERVCAGPGMEIIYRALAARDKKRIAANVDTADIVERAHA GDALALEAVECFCAILGTFAGNLAVTLGALGGIYIGGGVVPKLGELFMRSPFRARFEAKGRFEAYLANIPTYLITAEYPA FLGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGC QGLSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVEQAIDILNNARRIEFYGLGNSN IVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRAT VALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAPNAELAEAMARAKARAGASAGDEAADVLDWLSHGAAPAAK D
Sequences:
>Translated_641_residues MSTGAQTKAAAASQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGAEYPTLTDAIRKYLKDAKIGRVNHAAIAIAN PVDGDQVRMTNHNWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRVQIGGGTRRQNSVIGLMGPGTGLGVSGLI PADDRWIALGSEGGHATFAPMDEREDLVLQYARRKYPHVSFERVCAGPGMEIIYRALAARDKKRIAANVDTADIVERAHA GDALALEAVECFCAILGTFAGNLAVTLGALGGIYIGGGVVPKLGELFMRSPFRARFEAKGRFEAYLANIPTYLITAEYPA FLGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGC QGLSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVEQAIDILNNARRIEFYGLGNSN IVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRAT VALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAPNAELAEAMARAKARAGASAGDEAADVLDWLSHGAAPAAK D >Mature_640_residues STGAQTKAAAASQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGAEYPTLTDAIRKYLKDAKIGRVNHAAIAIANP VDGDQVRMTNHNWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRVQIGGGTRRQNSVIGLMGPGTGLGVSGLIP ADDRWIALGSEGGHATFAPMDEREDLVLQYARRKYPHVSFERVCAGPGMEIIYRALAARDKKRIAANVDTADIVERAHAG DALALEAVECFCAILGTFAGNLAVTLGALGGIYIGGGVVPKLGELFMRSPFRARFEAKGRFEAYLANIPTYLITAEYPAF LGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQ GLSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVEQAIDILNNARRIEFYGLGNSNI VAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRATV ALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAAPNAELAEAMARAKARAGASAGDEAADVLDWLSHGAAPAAKD
Specific function: Not Highly Important In E.Coli As Glucose Is Transported Into The Cell By The Pts System Already As Glucose 6-Phosphate. [C]
COG id: COG0837
COG function: function code G; Glucokinase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788732, Length=316, Percent_Identity=46.2025316455696, Blast_Score=281, Evalue=8e-77, Organism=Escherichia coli, GI1788159, Length=258, Percent_Identity=37.2093023255814, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI87082369, Length=251, Percent_Identity=28.2868525896414, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1788767, Length=249, Percent_Identity=26.5060240963855, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI87082130, Length=226, Percent_Identity=28.7610619469027, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 - InterPro: IPR000843 - InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF02685 Glucokinase; PF01418 HTH_6; PF01380 SIS [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 68378; Mature: 68247
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00356 HTH_LACI_1 ; PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGAQTKAAAASQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGAEYPTLTDAIR CCCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHH KYLKDAKIGRVNHAAIAIANPVDGDQVRMTNHNWSFSIEATRRALGFDTLLVVNDFTALA HHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHCCCEEEEHHHHHHHH MALPGLTDAQRVQIGGGTRRQNSVIGLMGPGTGLGVSGLIPADDRWIALGSEGGHATFAP HHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECC MDEREDLVLQYARRKYPHVSFERVCAGPGMEIIYRALAARDKKRIAANVDTADIVERAHA CCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCC GDALALEAVECFCAILGTFAGNLAVTLGALGGIYIGGGVVPKLGELFMRSPFRARFEAKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCHHHHCCCC RFEAYLANIPTYLITAEYPAFLGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERR CHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH VADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLATGLTGTIPM HHHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC SHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVEQAIDILNNARRIEFYGLGNSN CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCC IVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQ EEEECCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH AGAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAA CCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNAELAEAMARAKARAGASAGDEAADVLDWLSHGAAPAAKD CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STGAQTKAAAASQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGAEYPTLTDAIR CCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHH KYLKDAKIGRVNHAAIAIANPVDGDQVRMTNHNWSFSIEATRRALGFDTLLVVNDFTALA HHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHCCCEEEEHHHHHHHH MALPGLTDAQRVQIGGGTRRQNSVIGLMGPGTGLGVSGLIPADDRWIALGSEGGHATFAP HHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECC MDEREDLVLQYARRKYPHVSFERVCAGPGMEIIYRALAARDKKRIAANVDTADIVERAHA CCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCC GDALALEAVECFCAILGTFAGNLAVTLGALGGIYIGGGVVPKLGELFMRSPFRARFEAKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCHHHHCCCC RFEAYLANIPTYLITAEYPAFLGVSAILAEQLSNRTGGASSAVFERIRQMRDALTPAERR CHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH VADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLATGLTGTIPM HHHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC SHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVEQAIDILNNARRIEFYGLGNSN CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCC IVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQ EEEECCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH AGAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLVMIDILAVGVAIRRAA CCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNAELAEAMARAKARAGASAGDEAADVLDWLSHGAAPAAKD CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA