| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455432
Identifier: 126455432
GI number: 126455432
Start: 2075207
End: 2075776
Strand: Reverse
Name: 126455432
Synonym: BURPS1106A_2081
Alternate gene names: NA
Gene position: 2075776-2075207 (Counterclockwise)
Preceding gene: 126455429
Following gene: 126452018
Centisome position: 52.04
GC content: 66.49
Gene sequence:
>570_bases ATGCGCGCTGCCGCGCCCGCACGCGTGGCGCTCGCCGGCCGGTTCAGTGCCATCGAGCGTGCGCGCAATGCCCGTGATGC GCCAGCCGGCCTTCATCGACGCAACACCGGGATCGTAGTCGCACGCCGCGCCGCGGGCGTGTCGACCGGGCGATGCCCGA GTCGATCGGATGGAATTCTAACTTCTTTGATGTTCGTCCGATGCGGGTTCGCATATAAATGGATATCGGCCGCAGTCAGG CCGCCGCGCGAAGCCCGGGCGACGCATTCGAGCAAGAAAATAGCGGCGCGCCCGTCCGGATGCGGACGTCGGCGCCAACA GGATGTCGACGGTGGCGCGATCGTTCGGCGGCGGATGCGCTTTCGCCGCACGCGCGTTCGGACAGTCGATCGGGAATCGT CCCGCGGCTTTCGGACAAGACGCGGCCGTCGAGCGCGATCCCGCAGGCGCGTTTTCTCGTGGGGCGGCCGCCGGCGCGCA TTCGCATGCAAGCGTTTCGTCGATTTTCGCTCGTGGCGCTTTTCGCAACGCTATGATTTTCGCCGCCCGGCCGCGCATCT ATCTTCATGA
Upstream 100 bases:
>100_bases TTCGCACGCAGCCTCGCGACGTTTCGCCAGGGCGATACGCGCGTGGCCGACCGCAATCGTTTCGATATGCGCACTTTCCG GCGTGGGCGGGCGAAGCGCA
Downstream 100 bases:
>100_bases AAGGCCGATGTGCACATGCGTGAAATTTCGAATCACGCCGATTCCCGCTCGATTCGGCGAGCGGACACTTTTTCTCTCTG GATCGGGAGCGTATTGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRAAAPARVALAGRFSAIERARNARDAPAGLHRRNTGIVVARRAAGVSTGRCPSRSDGILTSLMFVRCGFAYKWISAAVR PPREARATHSSKKIAARPSGCGRRRQQDVDGGAIVRRRMRFRRTRVRTVDRESSRGFRTRRGRRARSRRRVFSWGGRRRA FACKRFVDFRSWRFSQRYDFRRPAAHLSS
Sequences:
>Translated_189_residues MRAAAPARVALAGRFSAIERARNARDAPAGLHRRNTGIVVARRAAGVSTGRCPSRSDGILTSLMFVRCGFAYKWISAAVR PPREARATHSSKKIAARPSGCGRRRQQDVDGGAIVRRRMRFRRTRVRTVDRESSRGFRTRRGRRARSRRRVFSWGGRRRA FACKRFVDFRSWRFSQRYDFRRPAAHLSS >Mature_189_residues MRAAAPARVALAGRFSAIERARNARDAPAGLHRRNTGIVVARRAAGVSTGRCPSRSDGILTSLMFVRCGFAYKWISAAVR PPREARATHSSKKIAARPSGCGRRRQQDVDGGAIVRRRMRFRRTRVRTVDRESSRGFRTRRGRRARSRRRVFSWGGRRRA FACKRFVDFRSWRFSQRYDFRRPAAHLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21632; Mature: 21632
Theoretical pI: Translated: 12.76; Mature: 12.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAAPARVALAGRFSAIERARNARDAPAGLHRRNTGIVVARRAAGVSTGRCPSRSDGIL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH TSLMFVRCGFAYKWISAAVRPPREARATHSSKKIAARPSGCGRRRQQDVDGGAIVRRRMR HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHH FRRTRVRTVDRESSRGFRTRRGRRARSRRRVFSWGGRRRAFACKRFVDFRSWRFSQRYDF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCC RRPAAHLSS CCCHHHCCC >Mature Secondary Structure MRAAAPARVALAGRFSAIERARNARDAPAGLHRRNTGIVVARRAAGVSTGRCPSRSDGIL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH TSLMFVRCGFAYKWISAAVRPPREARATHSSKKIAARPSGCGRRRQQDVDGGAIVRRRMR HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHH FRRTRVRTVDRESSRGFRTRRGRRARSRRRVFSWGGRRRAFACKRFVDFRSWRFSQRYDF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCC RRPAAHLSS CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA