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The map label for this gene is recN [H]

Identifier: 126455415

GI number: 126455415

Start: 3236269

End: 3237918

Strand: Direct

Name: recN [H]

Synonym: BURPS1106A_3319

Alternate gene names: 126455415

Gene position: 3236269-3237918 (Clockwise)

Preceding gene: 126452026

Following gene: 126452785

Centisome position: 81.14

GC content: 71.52

Gene sequence:

>1650_bases
ATGCTCCGCCACCTCTCGATCCGCGATTTCGTCATCGTCGCCGCGCTCGATCTCGAATTCGACAGCGGCTTCACCGTTTT
CTCAGGCGAAACGGGCGCCGGCAAATCGATCCTGATCGATGCGCTCGCGCTCGCGCTCGGCGAGCGCGCCGACGCGAGCG
TCGTGCGCACCGGCAGCGGCCGGGCCGACATCAGCGCCGAATTCACGCCGCACGACCGCGTCGCGCGCTGGCTCGACGAG
CACGCGTTCGACGCCGACGACACGGTGATGCTGCGGCGCGTCGTCGACGCGAACGGCCGCTCGCGCGCCTTCATCAACGG
CACGAGCGCGACGCTCGCGCAACTGCGCGAAGTGGGCGAGATGCTCGTCGACATCCACGGCCAGCACGCGCATCAGTTGC
TGATGCGCGCGGACGCGCAGCGCGAGCTGTTCGACACGCACGCGGGGCTCGCGGCCGACGCGGCCGCCGTCGCGCGCGGC
TATCGCGCGTGGCGCGACGCGACGCACGCGATCGACGCCGCACAGGCGCACGAGCGCGAGCGCCAGCTCGAACGCGAAAA
GCTCGCGTGGCAGCTCGCCGAGCTCGACAAGCTCGCGCCGCAGCCGGGCGAATGGGACGAGATCACCGCCGAGCACAAGC
GGCTCACGCATTCGGCGAACCTGATCGACGGCGTGCAGGGCGCGCTCGGCGCGATCTCCGAATCCGACGACGCGATGCTC
ACGCAACTGGGCGCGATCGTGTCGAGGCTGAGGAGCCTCGCCGAATACGACCCCGCGCTCAACGACGCGCTCGCATCGCT
CGAGCCGGCCGAGATCCAGCTGCAGGAGGCTTCGTATTCGCTGTCGCACTACGCGCAGCGGCTCGACCTCGACCCGGACC
GGCTCGCGCAGGTCGAGACGCGGCTCGACGCGCTGCACTCGACCGCGCGCAAGTTCCGGCTGCCGCCCGAGACGCTGCAC
GACGAGCACGAGGCGCGCCGCGCTCAGCTCGCCGAGCTCGACGCCGCGGCCGATCTGAGCGCGCTGCAGGCGGTTGCCGA
CAAGGCGAAGCAGGCGTATCTGGCCGACGCGCAGAAGCTGTCGAAGGCGCGCGCGCAAGCGGCGAAGGCGCTCGGCGTGG
CGGTGACCACCGGCATGCAGGAATTGTCGATGGCGGGCGGCAGCTTCGAGGTCGCGCTCGTGCCGCTCGCCGAAGGCGGC
GCGCACGGGCTCGAGCAGGTCGAGTTCCGCGTCGCGGGCCATGCGGGCGTGCCGCTGCGGCCGCTCGCGAAGGTCGCCTC
GGGCGGCGAGCTCGCGCGGATCAGCCTCGCGCTCGCGGTGATCGCGAGCGCGGCGAGCCCGACGCCGACGCTCATCTTCG
ACGAAGTCGACACGGGCATCGGCGGCGGCGTCGCCGAGGTGGTCGGGCGGCTGCTGCATCAGCTCGGACAGATGCGGCAG
GTGCTGTGCGTCACGCACCTGCCGCAGGTCGCCGCGCGCGGCGACCATCACTTTCAGGTCGCGAAGGGCGAGGACGGCGA
AGGCGGCACCGTGTCGACGGTCGTGCCGCTCGATCGCGCGAGCCGGATCGAGGAAGTCGCGCGGATGCTGGGCGGCCTCG
AGATCACCGCGACGACGCGCAAGCATGCGAAGGAAATGCTCACCGCGTGA

Upstream 100 bases:

>100_bases
ATTACGCGACGCTGCGCAAGAAGCTGCACTGGAACGAACATCCGTCGAGCGAAGAAGACGACGACGCATAAGTCCTCACG
CCATCCTCCGACCGACATCC

Downstream 100 bases:

>100_bases
CGTGGCGCGCGCCGGCCGCGACGGCTTTTCGGGCGGCGGCCGGCAGTGGGCGGCCGGCGGCTGCCGGATGGTAGCGAATG
GCGGCGGATGGCCAGTGGGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGERADASVVRTGSGRADISAEFTPHDRVARWLDE
HAFDADDTVMLRRVVDANGRSRAFINGTSATLAQLREVGEMLVDIHGQHAHQLLMRADAQRELFDTHAGLAADAAAVARG
YRAWRDATHAIDAAQAHERERQLEREKLAWQLAELDKLAPQPGEWDEITAEHKRLTHSANLIDGVQGALGAISESDDAML
TQLGAIVSRLRSLAEYDPALNDALASLEPAEIQLQEASYSLSHYAQRLDLDPDRLAQVETRLDALHSTARKFRLPPETLH
DEHEARRAQLAELDAAADLSALQAVADKAKQAYLADAQKLSKARAQAAKALGVAVTTGMQELSMAGGSFEVALVPLAEGG
AHGLEQVEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGQMRQ
VLCVTHLPQVAARGDHHFQVAKGEDGEGGTVSTVVPLDRASRIEEVARMLGGLEITATTRKHAKEMLTA

Sequences:

>Translated_549_residues
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGERADASVVRTGSGRADISAEFTPHDRVARWLDE
HAFDADDTVMLRRVVDANGRSRAFINGTSATLAQLREVGEMLVDIHGQHAHQLLMRADAQRELFDTHAGLAADAAAVARG
YRAWRDATHAIDAAQAHERERQLEREKLAWQLAELDKLAPQPGEWDEITAEHKRLTHSANLIDGVQGALGAISESDDAML
TQLGAIVSRLRSLAEYDPALNDALASLEPAEIQLQEASYSLSHYAQRLDLDPDRLAQVETRLDALHSTARKFRLPPETLH
DEHEARRAQLAELDAAADLSALQAVADKAKQAYLADAQKLSKARAQAAKALGVAVTTGMQELSMAGGSFEVALVPLAEGG
AHGLEQVEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGQMRQ
VLCVTHLPQVAARGDHHFQVAKGEDGEGGTVSTVVPLDRASRIEEVARMLGGLEITATTRKHAKEMLTA
>Mature_549_residues
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGERADASVVRTGSGRADISAEFTPHDRVARWLDE
HAFDADDTVMLRRVVDANGRSRAFINGTSATLAQLREVGEMLVDIHGQHAHQLLMRADAQRELFDTHAGLAADAAAVARG
YRAWRDATHAIDAAQAHERERQLEREKLAWQLAELDKLAPQPGEWDEITAEHKRLTHSANLIDGVQGALGAISESDDAML
TQLGAIVSRLRSLAEYDPALNDALASLEPAEIQLQEASYSLSHYAQRLDLDPDRLAQVETRLDALHSTARKFRLPPETLH
DEHEARRAQLAELDAAADLSALQAVADKAKQAYLADAQKLSKARAQAAKALGVAVTTGMQELSMAGGSFEVALVPLAEGG
AHGLEQVEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGQMRQ
VLCVTHLPQVAARGDHHFQVAKGEDGEGGTVSTVVPLDRASRIEEVARMLGGLEITATTRKHAKEMLTA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=44.6846846846847, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 58753; Mature: 58753

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGERADASVVRTGSG
CCCCCCHHHEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
RADISAEFTPHDRVARWLDEHAFDADDTVMLRRVVDANGRSRAFINGTSATLAQLREVGE
CCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
MLVDIHGQHAHQLLMRADAQRELFDTHAGLAADAAAVARGYRAWRDATHAIDAAQAHERE
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLEREKLAWQLAELDKLAPQPGEWDEITAEHKRLTHSANLIDGVQGALGAISESDDAML
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TQLGAIVSRLRSLAEYDPALNDALASLEPAEIQLQEASYSLSHYAQRLDLDPDRLAQVET
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCHHHHHHHHH
RLDALHSTARKFRLPPETLHDEHEARRAQLAELDAAADLSALQAVADKAKQAYLADAQKL
HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKARAQAAKALGVAVTTGMQELSMAGGSFEVALVPLAEGGAHGLEQVEFRVAGHAGVPLR
HHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEEECCCCCCCHHHHEEEEECCCCCCHH
PLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGQMRQ
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
VLCVTHLPQVAARGDHHFQVAKGEDGEGGTVSTVVPLDRASRIEEVARMLGGLEITATTR
HHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEHHH
KHAKEMLTA
HHHHHHHCC
>Mature Secondary Structure
MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGERADASVVRTGSG
CCCCCCHHHEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
RADISAEFTPHDRVARWLDEHAFDADDTVMLRRVVDANGRSRAFINGTSATLAQLREVGE
CCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
MLVDIHGQHAHQLLMRADAQRELFDTHAGLAADAAAVARGYRAWRDATHAIDAAQAHERE
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQLEREKLAWQLAELDKLAPQPGEWDEITAEHKRLTHSANLIDGVQGALGAISESDDAML
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TQLGAIVSRLRSLAEYDPALNDALASLEPAEIQLQEASYSLSHYAQRLDLDPDRLAQVET
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHEEEHHHHHHHHHHHHHCCCCHHHHHHHHH
RLDALHSTARKFRLPPETLHDEHEARRAQLAELDAAADLSALQAVADKAKQAYLADAQKL
HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKARAQAAKALGVAVTTGMQELSMAGGSFEVALVPLAEGGAHGLEQVEFRVAGHAGVPLR
HHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEEECCCCCCCHHHHEEEEECCCCCCHH
PLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGQMRQ
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
VLCVTHLPQVAARGDHHFQVAKGEDGEGGTVSTVVPLDRASRIEEVARMLGGLEITATTR
HHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEHHH
KHAKEMLTA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]