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The map label for this gene is oruR [H]

Identifier: 126455409

GI number: 126455409

Start: 1315386

End: 1316396

Strand: Direct

Name: oruR [H]

Synonym: BURPS1106A_1344

Alternate gene names: 126455409

Gene position: 1315386-1316396 (Clockwise)

Preceding gene: 126455383

Following gene: 126454274

Centisome position: 32.98

GC content: 64.59

Gene sequence:

>1011_bases
TTGAACAAGGCGACCGTATCGTCGGCCTATGCGCTTTTCATGCTGATGCTCGCGGAAGAGCGCGGCATCGCCGATGCGGA
CCTTCTCGCGCATACGGGCGTCACGCGCACGAAACTCGAGGAGCCTAACGCGCGCATCACGCCGCTGCAGCAGGCGGCGA
TCGTGTTCAATTTGCTCGGGATGACGAACGATCCGTCGATCGCGATCGAGATCGGCCTGCGAAGCAGCCTGACGAAATCG
GGGCTGATCGGCTTCGGCCTGATGAGCTGTGCGACGCTCGGCGAGGCGATCCAGCTCGGCATTCGCTATCTGCCGACGCG
CGTGCCGTTCTTCTCGGTGCGGTTCACGGAATTCGAGCACACGGTGCAGATCGACATTCTCGAAGCGTTTCCGCTTGGCA
GGCTGCGGCAATTCGCCGTCGAGAACTTCATGGTCGAGACGGCGATCCTGTTCAACTCGCTGCTGACGCCTTCGCATGAC
AAGACGATGAAGGCGAACGCCGAGCTCTGCTTCGAGTGGCCCGAGCCACCTTATTTCGCACGTTATCGTGATCGCCTGCC
GCGCTGCCATTTCGGCGCTCCGGCCAATCAGATCCGTTGCGAGGCCGCGCTGCTCGACGAGCCGATCAAGACCGCGAACG
CGCACACGGCGCAGATGATCGTCCAGCAGTGCGAGGCGGAGCTCGCGCGGCTCGGGTATGCGGAGAGCATCGTCGAGCGC
GTGCGCAATCTGCTGATTCGCGGCAGCCACGGCTATCCGTCGCTCGACGCGCTCGCGCGCGAGCTCCATCTGTCCGAGCG
CACGCTCAAGCGCAAGCTGAGCGACTATGGCACGACGTATTCGGCGCTGCTCGACGAGATCCGGCTGCGCGACGCGCTGC
GCCTGCTCGAAGGCACGACGCTGACGGTCGAGGAGATCGCGGCACGCGTCGGCTATACGGATCGCGCCAATTTCAGCCGC
GCGTTTCGGCGCTGGACCGGCACGTCGCCGAGCGACCGGCGCCGGACGTGA

Upstream 100 bases:

>100_bases
GCGCTGCGATGTGTCATCTGGGGCCATCCGTCGCTATAATCGACCGATCACCGCTTGGAGTCGAAGCATGGCCACGTCCG
TTCCGGACCCCACGAGGCAA

Downstream 100 bases:

>100_bases
CACGCGCGGGCGCGGTTGGGCGCGGTTGCGCGCCGCGAGCCGCCAGTCGCGCATTCGACCCGCTGCGGCGAGACGCGTGA
GGATGTACCATCCGGGAGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNKATVSSAYALFMLMLAEERGIADADLLAHTGVTRTKLEEPNARITPLQQAAIVFNLLGMTNDPSIAIEIGLRSSLTKS
GLIGFGLMSCATLGEAIQLGIRYLPTRVPFFSVRFTEFEHTVQIDILEAFPLGRLRQFAVENFMVETAILFNSLLTPSHD
KTMKANAELCFEWPEPPYFARYRDRLPRCHFGAPANQIRCEAALLDEPIKTANAHTAQMIVQQCEAELARLGYAESIVER
VRNLLIRGSHGYPSLDALARELHLSERTLKRKLSDYGTTYSALLDEIRLRDALRLLEGTTLTVEEIAARVGYTDRANFSR
AFRRWTGTSPSDRRRT

Sequences:

>Translated_336_residues
MNKATVSSAYALFMLMLAEERGIADADLLAHTGVTRTKLEEPNARITPLQQAAIVFNLLGMTNDPSIAIEIGLRSSLTKS
GLIGFGLMSCATLGEAIQLGIRYLPTRVPFFSVRFTEFEHTVQIDILEAFPLGRLRQFAVENFMVETAILFNSLLTPSHD
KTMKANAELCFEWPEPPYFARYRDRLPRCHFGAPANQIRCEAALLDEPIKTANAHTAQMIVQQCEAELARLGYAESIVER
VRNLLIRGSHGYPSLDALARELHLSERTLKRKLSDYGTTYSALLDEIRLRDALRLLEGTTLTVEEIAARVGYTDRANFSR
AFRRWTGTSPSDRRRT
>Mature_336_residues
MNKATVSSAYALFMLMLAEERGIADADLLAHTGVTRTKLEEPNARITPLQQAAIVFNLLGMTNDPSIAIEIGLRSSLTKS
GLIGFGLMSCATLGEAIQLGIRYLPTRVPFFSVRFTEFEHTVQIDILEAFPLGRLRQFAVENFMVETAILFNSLLTPSHD
KTMKANAELCFEWPEPPYFARYRDRLPRCHFGAPANQIRCEAALLDEPIKTANAHTAQMIVQQCEAELARLGYAESIVER
VRNLLIRGSHGYPSLDALARELHLSERTLKRKLSDYGTTYSALLDEIRLRDALRLLEGTTLTVEEIAARVGYTDRANFSR
AFRRWTGTSPSDRRRT

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37726; Mature: 37726

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKATVSSAYALFMLMLAEERGIADADLLAHTGVTRTKLEEPNARITPLQQAAIVFNLLG
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHC
MTNDPSIAIEIGLRSSLTKSGLIGFGLMSCATLGEAIQLGIRYLPTRVPFFSVRFTEFEH
CCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
TVQIDILEAFPLGRLRQFAVENFMVETAILFNSLLTPSHDKTMKANAELCFEWPEPPYFA
EEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEECCCCCHHH
RYRDRLPRCHFGAPANQIRCEAALLDEPIKTANAHTAQMIVQQCEAELARLGYAESIVER
HHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
VRNLLIRGSHGYPSLDALARELHLSERTLKRKLSDYGTTYSALLDEIRLRDALRLLEGTT
HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
LTVEEIAARVGYTDRANFSRAFRRWTGTSPSDRRRT
EEHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNKATVSSAYALFMLMLAEERGIADADLLAHTGVTRTKLEEPNARITPLQQAAIVFNLLG
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHC
MTNDPSIAIEIGLRSSLTKSGLIGFGLMSCATLGEAIQLGIRYLPTRVPFFSVRFTEFEH
CCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
TVQIDILEAFPLGRLRQFAVENFMVETAILFNSLLTPSHDKTMKANAELCFEWPEPPYFA
EEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEECCCCCHHH
RYRDRLPRCHFGAPANQIRCEAALLDEPIKTANAHTAQMIVQQCEAELARLGYAESIVER
HHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
VRNLLIRGSHGYPSLDALARELHLSERTLKRKLSDYGTTYSALLDEIRLRDALRLLEGTT
HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
LTVEEIAARVGYTDRANFSRAFRRWTGTSPSDRRRT
EEHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]