| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is fsr [H]
Identifier: 126455407
GI number: 126455407
Start: 1653764
End: 1655017
Strand: Reverse
Name: fsr [H]
Synonym: BURPS1106A_1694
Alternate gene names: 126455407
Gene position: 1655017-1653764 (Counterclockwise)
Preceding gene: 126452593
Following gene: 126452676
Centisome position: 41.5
GC content: 67.3
Gene sequence:
>1254_bases ATGGAAACCAGCCTCGACAACCGCCCGTCCGTTGCCCGTGCCGCCGCGTCGCCCGCGCCGGCCGCCGCCGTCTCGCGCAC CGTCTACCCGGTGCTCGGCGCGATCAGCTTCTCGCATCTGCTCAACGACATGATCCAGTCGCTGATCCTCGCGATCTATC CGATGCTGAAATCGGAATTCTCGCTGTCGTTCGCGCAGATCGGCCTCATCACGCTCACGTACCAGATCACCGCGTCGCTG CTGCAGCCCGTGATCGGCTTGTACACGGACAAGCGTCCGCAGCCGTTCTCGCTGCCCGTCGGCATGGGCTTCACGCTCAC CGGCCTGCTGCTGATGGCGTTCGCGCCGACGTTCCCGTTCCTGCTCGTCGCGGCCGCGCTCGTCGGCTGCGGCTCATCGG TGTTTCACCCGGAATCGTCGCGCGTCGCGCGGATGGCGTCGGGCGGCCGGCACGGGCTCGCGCAATCGCTGTTCCAGGTC GGCGGCAACGCCGGCTCGTCGCTCGGGCCGCTGCTCGCCGCGCTGATCGTGATCCCGCACGGCCAGCGCAGCATCGCGTG GTTTTCGGCCGCGGCGCTCGTCGCGATCTTCGTGCTCGTCCAGATCGGCCGCTGGTATCGGCGCCATCCGGCCGCGAAGA AGAAGGCCGCACACGCCGCGCATCCGACGCTGTCGCGCCGGCAGGTCGGGCTCGCGCTCGGCGTGCTCGTGATGCTCGTG TTCTCGAAGTACTTCTATCTGGCGAGCATCAACAGCTATTTCACGTTCTATCTGATCGACAAGTTCCACCTGTCGGTGCA GGCCGCGCAGATCCACCTGTTCGTGTTCCTCGCGGCCGTCGCGGCGGGCACGATCATCGGCGGGCCCGTCGGCGACCGGA TCGGGCGCAAGTACGTGATCTGGACGTCGATTCTCGGCGTCGCGCCGTTCACGCTGATGCTGCCGTATGCGAATCTGTTC TGGACCACGGTGCTGACCATCGTGATCGGCGTCGTGCTCGCATCGGCGTTCGCGGCGATCATCGTCTACGGCCAGGAGCT GATTCCGGGCAAGGTCGGCACGGTCGCCGGGCTCTTTTTCGGCCTGTCGTTCGGCCTCGGCGGCGTCGGCGCGGCGGTGC TCGGCCAGCTCGCCGACGCGACGAGCATCGCGTTCGTCTACAAGGTCTGCTCGTTCCTGCCGCTGATCGGCGTGCTGACG GTGTTCCTGCCGAACGTCGAGGGCAGGACGACGCTCGACAAGCAACGCGCCTGA
Upstream 100 bases:
>100_bases TGCCGATGAGACACATTACACTTCGTTGACCCATCAAAGAAAAACACGTGCCGTGCCCTGCCGGGGCACGCAGCGCCCCT TCCGAGACACTCGCATTCCT
Downstream 100 bases:
>100_bases CGGGGCGCGCGATCCGCGCGGCCGCCCGCGAACGGGGGCGGCCTCGGGGGCCTCGGCGGCCCGAGCGGTCCGGCCGCTTG GCGACTTGGCGACTTGGCGA
Product: fosmidomycin resistance protein
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues METSLDNRPSVARAAASPAPAAAVSRTVYPVLGAISFSHLLNDMIQSLILAIYPMLKSEFSLSFAQIGLITLTYQITASL LQPVIGLYTDKRPQPFSLPVGMGFTLTGLLLMAFAPTFPFLLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSLFQV GGNAGSSLGPLLAALIVIPHGQRSIAWFSAAALVAIFVLVQIGRWYRRHPAAKKKAAHAAHPTLSRRQVGLALGVLVMLV FSKYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTIIGGPVGDRIGRKYVIWTSILGVAPFTLMLPYANLF WTTVLTIVIGVVLASAFAAIIVYGQELIPGKVGTVAGLFFGLSFGLGGVGAAVLGQLADATSIAFVYKVCSFLPLIGVLT VFLPNVEGRTTLDKQRA
Sequences:
>Translated_417_residues METSLDNRPSVARAAASPAPAAAVSRTVYPVLGAISFSHLLNDMIQSLILAIYPMLKSEFSLSFAQIGLITLTYQITASL LQPVIGLYTDKRPQPFSLPVGMGFTLTGLLLMAFAPTFPFLLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSLFQV GGNAGSSLGPLLAALIVIPHGQRSIAWFSAAALVAIFVLVQIGRWYRRHPAAKKKAAHAAHPTLSRRQVGLALGVLVMLV FSKYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTIIGGPVGDRIGRKYVIWTSILGVAPFTLMLPYANLF WTTVLTIVIGVVLASAFAAIIVYGQELIPGKVGTVAGLFFGLSFGLGGVGAAVLGQLADATSIAFVYKVCSFLPLIGVLT VFLPNVEGRTTLDKQRA >Mature_417_residues METSLDNRPSVARAAASPAPAAAVSRTVYPVLGAISFSHLLNDMIQSLILAIYPMLKSEFSLSFAQIGLITLTYQITASL LQPVIGLYTDKRPQPFSLPVGMGFTLTGLLLMAFAPTFPFLLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSLFQV GGNAGSSLGPLLAALIVIPHGQRSIAWFSAAALVAIFVLVQIGRWYRRHPAAKKKAAHAAHPTLSRRQVGLALGVLVMLV FSKYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTIIGGPVGDRIGRKYVIWTSILGVAPFTLMLPYANLF WTTVLTIVIGVVLASAFAAIIVYGQELIPGKVGTVAGLFFGLSFGLGGVGAAVLGQLADATSIAFVYKVCSFLPLIGVLT VFLPNVEGRTTLDKQRA
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=406, Percent_Identity=66.9950738916256, Blast_Score=503, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44215; Mature: 44215
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSLDNRPSVARAAASPAPAAAVSRTVYPVLGAISFSHLLNDMIQSLILAIYPMLKSEF CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSFAQIGLITLTYQITASLLQPVIGLYTDKRPQPFSLPVGMGFTLTGLLLMAFAPTFPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSSLGPLLAALIVIPH HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC GQRSIAWFSAAALVAIFVLVQIGRWYRRHPAAKKKAAHAAHPTLSRRQVGLALGVLVMLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FSKYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTIIGGPVGDRIGRKYVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEHH WTSILGVAPFTLMLPYANLFWTTVLTIVIGVVLASAFAAIIVYGQELIPGKVGTVAGLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLSFGLGGVGAAVLGQLADATSIAFVYKVCSFLPLIGVLTVFLPNVEGRTTLDKQRA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure METSLDNRPSVARAAASPAPAAAVSRTVYPVLGAISFSHLLNDMIQSLILAIYPMLKSEF CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSFAQIGLITLTYQITASLLQPVIGLYTDKRPQPFSLPVGMGFTLTGLLLMAFAPTFPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LLVAAALVGCGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNAGSSLGPLLAALIVIPH HHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC GQRSIAWFSAAALVAIFVLVQIGRWYRRHPAAKKKAAHAAHPTLSRRQVGLALGVLVMLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FSKYFYLASINSYFTFYLIDKFHLSVQAAQIHLFVFLAAVAAGTIIGGPVGDRIGRKYVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEHH WTSILGVAPFTLMLPYANLFWTTVLTIVIGVVLASAFAAIIVYGQELIPGKVGTVAGLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLSFGLGGVGAAVLGQLADATSIAFVYKVCSFLPLIGVLTVFLPNVEGRTTLDKQRA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]