| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455406
Identifier: 126455406
GI number: 126455406
Start: 3269410
End: 3270207
Strand: Direct
Name: 126455406
Synonym: BURPS1106A_3348
Alternate gene names: NA
Gene position: 3269410-3270207 (Clockwise)
Preceding gene: 126453625
Following gene: 126451544
Centisome position: 81.97
GC content: 77.57
Gene sequence:
>798_bases ATGCGCGCTGAACTCGCCGCGCGCGCCGGCGCCGCCCGCTTCGCCCTCTATTACGCGCCGCCGCGCGCATCCGCGTGGTG GCGCGCCGGCTGTGCGTGGCTCGGCCGTGATCCGGAAGACGGCGCGACGCTCGCGCCGCCGCAGCCGGGCGCGCTGCGCC GGCCGGTGGACGCGCTGACGGTCGCGCCGCGCCGCTACGGCTGGCACGCGACGCTCGTCGCGCCGTTCGCGCTGCGCCCG GGCGTCGCACCGGACGAGCTCGTCGCGGCGGCCGCGGCGTGGGCGCGCGCGTGCGCGCCGCTGGCGATCGACGTCGACGT CGCCGCACTCGGCGCGTTCGTCGCGCTGCGGCCCGCGCACGCGCACGGCGACGACGCATTGCGCGCGCTCGCCGCCCGCG CGCTACGCGCGCTCGCGCCGCTGCGCCGCCCGCCCGCCGATGCCGAGCGCGCCAAGCGCGCCGCCGCGCCGCTCAGCGAG CGCCAGCGCGCCCTGCTCGCCGAATGGGGTTATCCGTACGTGCTCGACGAATACCGGTTTCACATGACGCTGTCCGATCC GCTCGACGATCCCGCCGAACGCGCCGCGCTGATCGACTGGTGGAAAGCCGCGGCGGCGGCGCTCGGGCCGCTGCCCGTCG ATCACGCGGCGATTTTCGTCGAGGCGCGACCGGGCACGCCGTTCATGCTGTGGAAGCGGCTGCCGTTCGGCCAACGCGCC GCCGCGACCGATGCCGCCGCGACAACCGACGCGGCCGATGCAGCCGACGCGGCCGAGTCCGGCGAGGCGCGACGATGA
Upstream 100 bases:
>100_bases GTCGACGTCGATGTCGACGGCACGCCGATCAAGTACGGCACGACCTATTTCGCGGCCGACCGCGTGCAGTTGCTGATCGA GAACGACAACGTGCCCGGCC
Downstream 100 bases:
>100_bases GCGCCGAGCGTCTCGTCTACGTGATGGGCCCGTCGGGCGCCGGCAAGGATTCGCTGCTCGCGTATGCGCGCAAGCACGTG CGCGAACCGCGCATCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALTVAPRRYGWHATLVAPFALRP GVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAHAHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSE RQRALLAEWGYPYVLDEYRFHMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGTPFMLWKRLPFGQRA AATDAAATTDAADAADAAESGEARR
Sequences:
>Translated_265_residues MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALTVAPRRYGWHATLVAPFALRP GVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAHAHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSE RQRALLAEWGYPYVLDEYRFHMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGTPFMLWKRLPFGQRA AATDAAATTDAADAADAAESGEARR >Mature_265_residues MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALTVAPRRYGWHATLVAPFALRP GVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAHAHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSE RQRALLAEWGYPYVLDEYRFHMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGTPFMLWKRLPFGQRA AATDAAATTDAADAADAAESGEARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28207; Mature: 28207
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALT CCCCHHHHCCCEEEEEEECCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHE VAPRRYGWHATLVAPFALRPGVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAH ECCHHCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCC AHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSERQRALLAEWGYPYVLDEYRF CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECEEE HMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGTPFMLWKRLPFGQRA EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCH AATDAAATTDAADAADAAESGEARR HCCCHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALT CCCCHHHHCCCEEEEEEECCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHE VAPRRYGWHATLVAPFALRPGVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAH ECCHHCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCC AHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSERQRALLAEWGYPYVLDEYRF CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECEEE HMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGTPFMLWKRLPFGQRA EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCH AATDAAATTDAADAADAAESGEARR HCCCHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA