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The map label for this gene is desA [H]

Identifier: 126455397

GI number: 126455397

Start: 2736552

End: 2737826

Strand: Direct

Name: desA [H]

Synonym: BURPS1106A_2776

Alternate gene names: 126455397

Gene position: 2736552-2737826 (Clockwise)

Preceding gene: 126454810

Following gene: 126453130

Centisome position: 68.61

GC content: 68.94

Gene sequence:

>1275_bases
GTGCCGTGCGCGCCGCATCGCAAGCGCGATCCGGCGGCCGGCATGCGCGCCGCCGCCCGCGCCCGCCGCCGCATGGCTGC
GGATCGCGGCGCGACGGCGCGCCGCGCATCGCTGTCTCTTTGTGTGACCGACTCCATGAACGACTCCTCCCACCCCATTC
GCGTCGACGAGCCGATGCCGCACCGCAAGCTCATCCGCTCATGGATCACGCCGTTCGGCGAGCGCGTGATCGCGCGCTCG
ATCGTGCTGCTCGCCGTCGATTATCTGCTGCTCTTCGCCGCGTTCGCGGGCGCGCTGCTCGCCGCGTCGGGCATCGTGAA
GATCGTCTGCGGGATGGCGGCCGGCTTCATCACCGGGCGCCTTTTCATCATCGGTCACGACGCGTGCCACCAGAGCCTCA
CGCCGAATCACCGGCTCAACCGCTGGCTCGGCCGCATCGCGTTCCTGCCGTCGCTCACGCCGTACAGCCTGTGGGAAGTC
GGCCACAACGTCGTCCACCACGGCTACACGAACCTGAAGGGCTTCGATTTCGTCTGGGCGCCGCTCACGCCCGGCGAGTA
CGCGGCGCTATCGCCCGCGCGGCGCCTGCTCGATCGCATTTATCGCAGCGGCTGGGCGCCGGGGCTCTACTATCTCGTCG
AGATCTGGTGGCTGCGGATGTACTTTCCGGCGAAGGCCTACCTCGGCGCGTCGCGGCCGATCTTCCGCCGCGACTGTCTG
CTCGTCACGGGCTTCGCCGCGCTGTGGATCGGCGCGGTGGTCTGGATCGCCGCGGCGACCCGGCAATCGATGCCGCTGCT
GCTCGTCACGGGCGTCGCCGTGCCGTTCCTGTTCTGGTGCTCGATGATCGGCTTCGTCGTCTACGTTCACCATACCGATC
CGCGCATCTCGTGGCATGCGAACCGCGCCGAGTGGTCGCGCGCGGCGCCGTTCGTATCGACCACGTTGCACCTGACGTTC
CCGTTCGGCATCGGCGGCCTGCTGCATCACATCATGGAGCACACCGCGCACCACGTCGACATGAGCATCCCGCTGTACGG
GCTGAAGGACGCGCAGGCGAAGCTCGAGGCGATGCTGCCGGAGCGCATCGTCGTGCAGCGCTTCAGTTGGCGCTGGTATT
TCGACACCGCGCGGCGTTGCAAGCTCTACGATACGGACCGCAAGCGCTGGACCGACTATCGCGGCCGCGCGACGAGCGAC
GCGCATCTGCGCGCGGATGCGCCGATGGCCGAGCAGCGGCCGATCGACGCGCCGCATGGGCCGGGCGGCGCGTGA

Upstream 100 bases:

>100_bases
TGTCTATCGACGATGCCGTCCCGCGCCGGACGGCATTGCCCTTGTCGCGGCCGGATCGCGCGGGCTGTCGACGCCCGCGC
CGCTGCGCCCGCTTGTCCGC

Downstream 100 bases:

>100_bases
CGCGGGCGGCTGCGCGGTTAGTGGTTAGTGGTTAGTGGTTAGCGGTTAGCGGTTAGCGGTTAGCGGTTAGCGGTTAGCGG
TTAGCGGTTAGCGGTTAGCG

Product: fatty acid desaturase family protein

Products: NA

Alternate protein names: Delta(12)-desaturase [H]

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MPCAPHRKRDPAAGMRAAARARRRMAADRGATARRASLSLCVTDSMNDSSHPIRVDEPMPHRKLIRSWITPFGERVIARS
IVLLAVDYLLLFAAFAGALLAASGIVKIVCGMAAGFITGRLFIIGHDACHQSLTPNHRLNRWLGRIAFLPSLTPYSLWEV
GHNVVHHGYTNLKGFDFVWAPLTPGEYAALSPARRLLDRIYRSGWAPGLYYLVEIWWLRMYFPAKAYLGASRPIFRRDCL
LVTGFAALWIGAVVWIAAATRQSMPLLLVTGVAVPFLFWCSMIGFVVYVHHTDPRISWHANRAEWSRAAPFVSTTLHLTF
PFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLPERIVVQRFSWRWYFDTARRCKLYDTDRKRWTDYRGRATSD
AHLRADAPMAEQRPIDAPHGPGGA

Sequences:

>Translated_424_residues
MPCAPHRKRDPAAGMRAAARARRRMAADRGATARRASLSLCVTDSMNDSSHPIRVDEPMPHRKLIRSWITPFGERVIARS
IVLLAVDYLLLFAAFAGALLAASGIVKIVCGMAAGFITGRLFIIGHDACHQSLTPNHRLNRWLGRIAFLPSLTPYSLWEV
GHNVVHHGYTNLKGFDFVWAPLTPGEYAALSPARRLLDRIYRSGWAPGLYYLVEIWWLRMYFPAKAYLGASRPIFRRDCL
LVTGFAALWIGAVVWIAAATRQSMPLLLVTGVAVPFLFWCSMIGFVVYVHHTDPRISWHANRAEWSRAAPFVSTTLHLTF
PFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLPERIVVQRFSWRWYFDTARRCKLYDTDRKRWTDYRGRATSD
AHLRADAPMAEQRPIDAPHGPGGA
>Mature_423_residues
PCAPHRKRDPAAGMRAAARARRRMAADRGATARRASLSLCVTDSMNDSSHPIRVDEPMPHRKLIRSWITPFGERVIARSI
VLLAVDYLLLFAAFAGALLAASGIVKIVCGMAAGFITGRLFIIGHDACHQSLTPNHRLNRWLGRIAFLPSLTPYSLWEVG
HNVVHHGYTNLKGFDFVWAPLTPGEYAALSPARRLLDRIYRSGWAPGLYYLVEIWWLRMYFPAKAYLGASRPIFRRDCLL
VTGFAALWIGAVVWIAAATRQSMPLLLVTGVAVPFLFWCSMIGFVVYVHHTDPRISWHANRAEWSRAAPFVSTTLHLTFP
FGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLPERIVVQRFSWRWYFDTARRCKLYDTDRKRWTDYRGRATSDA
HLRADAPMAEQRPIDAPHGPGGA

Specific function: Can introduce a second cis double bond at the Delta(12) position of fatty acid bound to membranes glycerolipids. This enzyme is involved in chilling tolerance because the phase transition temperature of lipids of cellular membranes depends on the degree o

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 47765; Mature: 47634

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCAPHRKRDPAAGMRAAARARRRMAADRGATARRASLSLCVTDSMNDSSHPIRVDEPMP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEEECCCCCCCCCEECCCCCC
HRKLIRSWITPFGERVIARSIVLLAVDYLLLFAAFAGALLAASGIVKIVCGMAAGFITGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
LFIIGHDACHQSLTPNHRLNRWLGRIAFLPSLTPYSLWEVGHNVVHHGYTNLKGFDFVWA
EEEEECHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
PLTPGEYAALSPARRLLDRIYRSGWAPGLYYLVEIWWLRMYFPAKAYLGASRPIFRRDCL
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHH
LVTGFAALWIGAVVWIAAATRQSMPLLLVTGVAVPFLFWCSMIGFVVYVHHTDPRISWHA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECC
NRAEWSRAAPFVSTTLHLTFPFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLP
CHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCH
ERIVVQRFSWRWYFDTARRCKLYDTDRKRWTDYRGRATSDAHLRADAPMAEQRPIDAPHG
HHHHHHHHCCEEEECCCCCCEEEECCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PGGA
CCCC
>Mature Secondary Structure 
PCAPHRKRDPAAGMRAAARARRRMAADRGATARRASLSLCVTDSMNDSSHPIRVDEPMP
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCEEEEEEECCCCCCCCCEECCCCCC
HRKLIRSWITPFGERVIARSIVLLAVDYLLLFAAFAGALLAASGIVKIVCGMAAGFITGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
LFIIGHDACHQSLTPNHRLNRWLGRIAFLPSLTPYSLWEVGHNVVHHGYTNLKGFDFVWA
EEEEECHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
PLTPGEYAALSPARRLLDRIYRSGWAPGLYYLVEIWWLRMYFPAKAYLGASRPIFRRDCL
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHH
LVTGFAALWIGAVVWIAAATRQSMPLLLVTGVAVPFLFWCSMIGFVVYVHHTDPRISWHA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECC
NRAEWSRAAPFVSTTLHLTFPFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLP
CHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCH
ERIVVQRFSWRWYFDTARRCKLYDTDRKRWTDYRGRATSDAHLRADAPMAEQRPIDAPHG
HHHHHHHHCCEEEECCCCCCEEEECCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PGGA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA