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The map label for this gene is nudJ [H]

Identifier: 126455373

GI number: 126455373

Start: 3305256

End: 3305765

Strand: Direct

Name: nudJ [H]

Synonym: BURPS1106A_3388

Alternate gene names: 126455373

Gene position: 3305256-3305765 (Clockwise)

Preceding gene: 126454955

Following gene: 126451955

Centisome position: 82.87

GC content: 71.37

Gene sequence:

>510_bases
ATGAAACCCGAAATCTGGACCCCGCACGTGACGGTCGCCGCGATCGTCGAACGCGACGGGCGCTTTCTCGTGATCGAAGA
ACACACGTCGTCCGGCCTGCGCGTCAACCAGCCCGCCGGCCACCTCGAGGCCGGCGAGACGCTCGTCGAAGCGGTCGCGC
GCGAGACGCTCGAGGAAACCGCGCACCCGTTCGAGCCGCAAGCGCTCGTCGGCGTGTACGTCGCGCACTACGCGCGCCCG
TCGAGCAGCGGCGCGACCTATCTGCGCTTCGCGTTCTGCGGCCGCGCGGGCGAGCGCATCGCCCACCGCGCGCTCGACGA
CGGGATCGTCCGCACGCTGTGGCTGACGGCCGACGAGCTGCGCGCATGCGAGGCGCGCCACCGCTCGCCCGCGGTGATGC
GCTGCGTCGACGACTACCTCGCCGGGCGCCGCGTGCCGCTCGATTTCGTGCATACGCACTCGGTCGCGCCGTATCGCGCG
GCCCCGGATCATCAGGCGGTGGGCAAATGA

Upstream 100 bases:

>100_bases
GCGAGTGCGCGCCGGCCACACGGGGGAGTTGCGCGGGGGTCGGAACCGCGCTATACGCGCGTTCGGCAGCGGCGCGGCGC
AACCGGTAAAATGCGCGGCT

Downstream 100 bases:

>100_bases
CGAAGCGTCGGGTCGTGGTGGGGATGTCGGGCGGCGTCGATTCGTCGGTGACCGCGTGGCTCTTGAAGGAGCAGGGCTAC
GACGTCGTCGGCCTGTTCAT

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKPEIWTPHVTVAAIVERDGRFLVIEEHTSSGLRVNQPAGHLEAGETLVEAVARETLEETAHPFEPQALVGVYVAHYARP
SSSGATYLRFAFCGRAGERIAHRALDDGIVRTLWLTADELRACEARHRSPAVMRCVDDYLAGRRVPLDFVHTHSVAPYRA
APDHQAVGK

Sequences:

>Translated_169_residues
MKPEIWTPHVTVAAIVERDGRFLVIEEHTSSGLRVNQPAGHLEAGETLVEAVARETLEETAHPFEPQALVGVYVAHYARP
SSSGATYLRFAFCGRAGERIAHRALDDGIVRTLWLTADELRACEARHRSPAVMRCVDDYLAGRRVPLDFVHTHSVAPYRA
APDHQAVGK
>Mature_169_residues
MKPEIWTPHVTVAAIVERDGRFLVIEEHTSSGLRVNQPAGHLEAGETLVEAVARETLEETAHPFEPQALVGVYVAHYARP
SSSGATYLRFAFCGRAGERIAHRALDDGIVRTLWLTADELRACEARHRSPAVMRCVDDYLAGRRVPLDFVHTHSVAPYRA
APDHQAVGK

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=146, Percent_Identity=37.6712328767123, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 18671; Mature: 18671

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEIWTPHVTVAAIVERDGRFLVIEEHTSSGLRVNQPAGHLEAGETLVEAVARETLEET
CCCCCCCCCHHEEEEEECCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
AHPFEPQALVGVYVAHYARPSSSGATYLRFAFCGRAGERIAHRALDDGIVRTLWLTADEL
CCCCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHH
RACEARHRSPAVMRCVDDYLAGRRVPLDFVHTHSVAPYRAAPDHQAVGK
HHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPEIWTPHVTVAAIVERDGRFLVIEEHTSSGLRVNQPAGHLEAGETLVEAVARETLEET
CCCCCCCCCHHEEEEEECCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
AHPFEPQALVGVYVAHYARPSSSGATYLRFAFCGRAGERIAHRALDDGIVRTLWLTADEL
CCCCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHH
RACEARHRSPAVMRCVDDYLAGRRVPLDFVHTHSVAPYRAAPDHQAVGK
HHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA