| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455361
Identifier: 126455361
GI number: 126455361
Start: 3396352
End: 3396849
Strand: Reverse
Name: 126455361
Synonym: BURPS1106A_3491
Alternate gene names: NA
Gene position: 3396849-3396352 (Counterclockwise)
Preceding gene: 126454227
Following gene: 126454656
Centisome position: 85.17
GC content: 69.28
Gene sequence:
>498_bases ATGACGCCGAACGATGCCGCGGCGCCCGCCGCGCGCGATGCGCAACACGCGCCGCGCGGGCGGGACGTGACGACCCCATT TCTCATCGGAGCTGACATGAAAATCCAATCGGCATTCGCGTGGTCCGCGCTCGTTGTCGCAGGCCTCGCGTTCTTCACGC AGACGGCGTTCGCGCAGGAGGCGGCGAGCGATGCGCAATCCGATCGCCACGCGCAGGCGCAGCTCGGCGATCCGTACGTG CCGCCCGCCGCGCGCAAGCCGACGGCCGGCACGCAGACGTCGGGCGCCGCGCTGCACGCGCAGGTCGTGCGCAAGCTGCA GCGCCAGTTCGCGGCGGCCGACGCCGGCAATGCGGGGCTGACCGAAGCGCAGGCAAAGGCGGCGGGCCTCGGCTACGTCT CGAAGAACTTCAAGCAGATCGACGTGAACCACACCGGTCGCGTGTCGTTCTCCGACGTGCAGCGCTACATCCAATCGCAG AGCGCGACGCAGAAGTAA
Upstream 100 bases:
>100_bases AGGATTACCAGGGCGGGCACATGGTCTACCTGGACGATACGTCCCGGCCGCAGGAAAAAGCCGATCTGGCGACGTTCTAC GCGGCGGCGCCTGCCGCGCG
Downstream 100 bases:
>100_bases GCCGCGCGCACATCGCCCACCCCACAGCGAGCACGGGGCGCGGATCGAACGGGCTCAGCCGGGCAATCGGCTCAGCCCGT TTTTTCATGCGCGCGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTPNDAAAPAARDAQHAPRGRDVTTPFLIGADMKIQSAFAWSALVVAGLAFFTQTAFAQEAASDAQSDRHAQAQLGDPYV PPAARKPTAGTQTSGAALHAQVVRKLQRQFAAADAGNAGLTEAQAKAAGLGYVSKNFKQIDVNHTGRVSFSDVQRYIQSQ SATQK
Sequences:
>Translated_165_residues MTPNDAAAPAARDAQHAPRGRDVTTPFLIGADMKIQSAFAWSALVVAGLAFFTQTAFAQEAASDAQSDRHAQAQLGDPYV PPAARKPTAGTQTSGAALHAQVVRKLQRQFAAADAGNAGLTEAQAKAAGLGYVSKNFKQIDVNHTGRVSFSDVQRYIQSQ SATQK >Mature_164_residues TPNDAAAPAARDAQHAPRGRDVTTPFLIGADMKIQSAFAWSALVVAGLAFFTQTAFAQEAASDAQSDRHAQAQLGDPYVP PAARKPTAGTQTSGAALHAQVVRKLQRQFAAADAGNAGLTEAQAKAAGLGYVSKNFKQIDVNHTGRVSFSDVQRYIQSQS ATQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17324; Mature: 17193
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNDAAAPAARDAQHAPRGRDVTTPFLIGADMKIQSAFAWSALVVAGLAFFTQTAFAQE CCCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AASDAQSDRHAQAQLGDPYVPPAARKPTAGTQTSGAALHAQVVRKLQRQFAAADAGNAGL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC TEAQAKAAGLGYVSKNFKQIDVNHTGRVSFSDVQRYIQSQSATQK HHHHHHHHHCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TPNDAAAPAARDAQHAPRGRDVTTPFLIGADMKIQSAFAWSALVVAGLAFFTQTAFAQE CCCCCCCCCCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AASDAQSDRHAQAQLGDPYVPPAARKPTAGTQTSGAALHAQVVRKLQRQFAAADAGNAGL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC TEAQAKAAGLGYVSKNFKQIDVNHTGRVSFSDVQRYIQSQSATQK HHHHHHHHHCCHHHCCCEEECCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA