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The map label for this gene is rsmI [H]

Identifier: 126455349

GI number: 126455349

Start: 3809058

End: 3809945

Strand: Direct

Name: rsmI [H]

Synonym: BURPS1106A_3901

Alternate gene names: 126455349

Gene position: 3809058-3809945 (Clockwise)

Preceding gene: 126452359

Following gene: 126452838

Centisome position: 95.5

GC content: 70.27

Gene sequence:

>888_bases
ATGACTTCCCTCCTCGATCTCGCGCAGGCGCAGCACTATCCGGCAGGCGCCCTCTACATCGTCGCGACGCCGATCGGCAA
CGCCGCCGACATCACACTGCGCGCGCTGCACGTGCTCACGCTCGCCGATCGCATCGCCGCCGAGGACACCCGCAACACGG
GCCAACTGCTCGTGCGCTACGGAATCTCGAAGCCGCTCGTCGCCGTGCACGAGCACAACGAACGCGCGGCCGCCGCGAAG
CTGATCGATCACCTGCGCGCGGGCGAGCGGATCGCCTATGTGTCGGACGCCGGCACACCCGGCATTTCCGATCCGGGCGC
AAAACTCGTCGACGCCGTGCGCGCCGCCGGCTTCGGCGTGATCCCGCTGCCGGGCGCGAACGCGGCCGCGGCGGCGGTCA
GCGTCGCGGGCGACTGGGCGGGCGCCTTCACGTTCGCGGGTTTCCTGCCGCCGAAGCCGAAGCAGCGCGACGCCGCGCTC
CAGCCGCTGAAGACGCATCCGTACGCGCTCGTGTTCTACGAGGCGCCGCACCGGATCGTCGAGACGGTCGAAGCGCTCGC
GGCGGCACTCGGCGGCGAACGCCGGCTGTTGATCGCGCGCGAGCTCACCAAGCTACACGAGGAGTTGTTCGAGGGCACGC
TGGCTGATGGGCCAATGTGGCTGCGCGCGGACGCGAACCGGCAGCGCGGCGAATTCGTGCTTGTCGTCGAGGGCGCGCCG
CAGGGCGCGCAGGACGAAGACGAACGCGCGCACGACGCGCTGCTCGAGCTGCTGCTCGACGAAGTGCCGGTGAAGAGCGC
GGCGAAGCTCGCGGCGGCGCTAACGGGAGCGTCGCGCAACGCGCTCTACGCGCGCGCACTCGCGCTGAAGAAAGAGGAAG
AAGAGTAA

Upstream 100 bases:

>100_bases
CGGCGCGGCTTCGGGTTCGCCCGTTCCCGGGCTCGCCTCGCGCGCGTGGCACAATGCGGAGCTTCTTCCGTTTGCGCCGC
GTGCGGGCGCCTTTCGTGTC

Downstream 100 bases:

>100_bases
GGATTCGCTGCAAAAGCGAAAGGGCCGCATGAAGCGGCCCTTTTCGTCTGCGTTCGATCGCCGCTCGGCGGGCGATGCAA
CGCCGTTGTCGCGATTACTT

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTSLLDLAQAQHYPAGALYIVATPIGNAADITLRALHVLTLADRIAAEDTRNTGQLLVRYGISKPLVAVHEHNERAAAAK
LIDHLRAGERIAYVSDAGTPGISDPGAKLVDAVRAAGFGVIPLPGANAAAAAVSVAGDWAGAFTFAGFLPPKPKQRDAAL
QPLKTHPYALVFYEAPHRIVETVEALAAALGGERRLLIARELTKLHEELFEGTLADGPMWLRADANRQRGEFVLVVEGAP
QGAQDEDERAHDALLELLLDEVPVKSAAKLAAALTGASRNALYARALALKKEEEE

Sequences:

>Translated_295_residues
MTSLLDLAQAQHYPAGALYIVATPIGNAADITLRALHVLTLADRIAAEDTRNTGQLLVRYGISKPLVAVHEHNERAAAAK
LIDHLRAGERIAYVSDAGTPGISDPGAKLVDAVRAAGFGVIPLPGANAAAAAVSVAGDWAGAFTFAGFLPPKPKQRDAAL
QPLKTHPYALVFYEAPHRIVETVEALAAALGGERRLLIARELTKLHEELFEGTLADGPMWLRADANRQRGEFVLVVEGAP
QGAQDEDERAHDALLELLLDEVPVKSAAKLAAALTGASRNALYARALALKKEEEE
>Mature_294_residues
TSLLDLAQAQHYPAGALYIVATPIGNAADITLRALHVLTLADRIAAEDTRNTGQLLVRYGISKPLVAVHEHNERAAAAKL
IDHLRAGERIAYVSDAGTPGISDPGAKLVDAVRAAGFGVIPLPGANAAAAAVSVAGDWAGAFTFAGFLPPKPKQRDAALQ
PLKTHPYALVFYEAPHRIVETVEALAAALGGERRLLIARELTKLHEELFEGTLADGPMWLRADANRQRGEFVLVVEGAPQ
GAQDEDERAHDALLELLLDEVPVKSAAKLAAALTGASRNALYARALALKKEEEE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=274, Percent_Identity=50.3649635036496, Blast_Score=229, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31297; Mature: 31166

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLLDLAQAQHYPAGALYIVATPIGNAADITLRALHVLTLADRIAAEDTRNTGQLLVRY
CCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE
GISKPLVAVHEHNERAAAAKLIDHLRAGERIAYVSDAGTPGISDPGAKLVDAVRAAGFGV
CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE
IPLPGANAAAAAVSVAGDWAGAFTFAGFLPPKPKQRDAALQPLKTHPYALVFYEAPHRIV
EECCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEEECCCHHHH
ETVEALAAALGGERRLLIARELTKLHEELFEGTLADGPMWLRADANRQRGEFVLVVEGAP
HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEECCC
QGAQDEDERAHDALLELLLDEVPVKSAAKLAAALTGASRNALYARALALKKEEEE
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSLLDLAQAQHYPAGALYIVATPIGNAADITLRALHVLTLADRIAAEDTRNTGQLLVRY
CHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEE
GISKPLVAVHEHNERAAAAKLIDHLRAGERIAYVSDAGTPGISDPGAKLVDAVRAAGFGV
CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE
IPLPGANAAAAAVSVAGDWAGAFTFAGFLPPKPKQRDAALQPLKTHPYALVFYEAPHRIV
EECCCCCHHHHHEECCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEEECCCHHHH
ETVEALAAALGGERRLLIARELTKLHEELFEGTLADGPMWLRADANRQRGEFVLVVEGAP
HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEECCC
QGAQDEDERAHDALLELLLDEVPVKSAAKLAAALTGASRNALYARALALKKEEEE
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]