| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455330
Identifier: 126455330
GI number: 126455330
Start: 754643
End: 755320
Strand: Direct
Name: 126455330
Synonym: BURPS1106A_0774
Alternate gene names: NA
Gene position: 754643-755320 (Clockwise)
Preceding gene: 126455230
Following gene: 126451694
Centisome position: 18.92
GC content: 72.71
Gene sequence:
>678_bases ATGCAGATTCATGAAGTACGCATACCCATCGGAAAAGTCGAACTGAACGGCCTGCTCGCGGCGCCCGAGCAGGCATCGGG CATCGTCGTGTTCGCGCACGGCAGCGGCAGCAGCCGGCTCAGCCCGCGCAACCAGGAAGTCGCGGCGGTATTGCAGCGCG CGGGGCTCGCGACGCTCCTGTTCGATCTGCTGACGCTCGAGGAGCAGCGGCGCGACGCGGTCACGGCCGAGTACCGGTTC GCGATCGCGTTTCTCGCGCGCCGGCTCGTGAGCGCGCTCGACTGGCTGCGCGAGCGGCCGGACGTCGGCGCGTTGCCCGT CGGGCTGTTCGGCGCGAGCACGGGCGCGGCGGCCGCGCTGATCGCGGCGAACGCGCGCGGGCGCGTCGTGCGCGCGGTCG TCTCGCGCGGCGGGCGTCCCGATCTCGCCGGCGATGCGTTGCCGCGCGTGCGCGTGCCGACGCTGCTCGTCGTCGGCGAG CGCGACGACGAAGTGCTCCGGCTGAACCGCGTCGCGGCCGGCTGGCTGATCGGCGAATCGAAGCTCGTCGTCGTGCCGGG CGCGACGCATCTGTTCGAGGAGCCGGGCACGCTCGACGAAGTCGCGCGCGTCGCGGCCGACTGGTTCGTCGCGCATCTCG GCGAGGGCCGGCCATCGCCCGAAGGGGCGCGAAGATGA
Upstream 100 bases:
>100_bases GAAACGAACCCGCTCGAACCGCTCGCGCCGCCCGGCGCGCGGCAGCCGCGCGAGACGCCGGTGTCCGCGCCGTGACGGCG AGGCGGACGTGGAGAACGCA
Downstream 100 bases:
>100_bases GGGCGAAGCCTGCCTGCACGCGGGCGCTGCTCGCCGACCTGTACGAATTCACGATGCTGCAGTCGTACTTCGACTGCGGG ATGAACGATACGGCGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLLFDLLTLEEQRRDAVTAEYRF AIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAALIAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGE RDDEVLRLNRVAAGWLIGESKLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR
Sequences:
>Translated_225_residues MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLLFDLLTLEEQRRDAVTAEYRF AIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAALIAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGE RDDEVLRLNRVAAGWLIGESKLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR >Mature_225_residues MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLLFDLLTLEEQRRDAVTAEYRF AIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAALIAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGE RDDEVLRLNRVAAGWLIGESKLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 23992; Mature: 23992
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLL CCCEEEECCCCEEEECCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHH FDLLTLEEQRRDAVTAEYRFAIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHEE IAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGERDDEVLRLNRVAAGWLIGES EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEEECCC KLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR CEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQIHEVRIPIGKVELNGLLAAPEQASGIVVFAHGSGSSRLSPRNQEVAAVLQRAGLATLL CCCEEEECCCCEEEECCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHH FDLLTLEEQRRDAVTAEYRFAIAFLARRLVSALDWLRERPDVGALPVGLFGASTGAAAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHEE IAANARGRVVRAVVSRGGRPDLAGDALPRVRVPTLLVVGERDDEVLRLNRVAAGWLIGES EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEEECCC KLVVVPGATHLFEEPGTLDEVARVAADWFVAHLGEGRPSPEGARR CEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]