Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126455282

Identifier: 126455282

GI number: 126455282

Start: 2969327

End: 2969638

Strand: Direct

Name: 126455282

Synonym: BURPS1106A_3039

Alternate gene names: NA

Gene position: 2969327-2969638 (Clockwise)

Preceding gene: 126451692

Following gene: 126453207

Centisome position: 74.45

GC content: 63.78

Gene sequence:

>312_bases
TTGCCGGCCTGCACGCCGCTCGACATGCGCTTCACGGGAGAATCGATGGCCATCGAATTGGACAAGGATGTGCGCGATCG
CGCCATCGCGTCACTGCAACGCTATTTCACCGAAAATCTGGAAGAGCCGATCGGCAATCTCCAGGCGGGCGCGCTGCTGC
ATTTCTTCGTCGAGGAGGTCGGCCCCGCGATCTACAACCTCGCGATCGCCGACGCGCAGTCGAGCCTGCACGCGCGCGTC
GCCGAGCTCGACATCGACTGCCATCAGGCGCCGTTCGGCTACTGGAAGAAGACGCCGGTGCGCAAGCGCTGA

Upstream 100 bases:

>100_bases
GAATCGTTGTGTAAGGGGAGAATTCTAACGCACCGCGCGCGCGCCACGGCATCGCCCAACCGGCCGATGCCGCAAACCGG
GCGTCCGTGGCAGTATCGCG

Downstream 100 bases:

>100_bases
ACCGACGGACGGCGACGGCCGCCACCCGCGTCGGCGCCGCTAGTCGTTCTTGCCCGCGTCGCGGTCGAGCTCGCGCAGCC
ATGCAAGCTTGTCGGCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MPACTPLDMRFTGESMAIELDKDVRDRAIASLQRYFTENLEEPIGNLQAGALLHFFVEEVGPAIYNLAIADAQSSLHARV
AELDIDCHQAPFGYWKKTPVRKR

Sequences:

>Translated_103_residues
MPACTPLDMRFTGESMAIELDKDVRDRAIASLQRYFTENLEEPIGNLQAGALLHFFVEEVGPAIYNLAIADAQSSLHARV
AELDIDCHQAPFGYWKKTPVRKR
>Mature_102_residues
PACTPLDMRFTGESMAIELDKDVRDRAIASLQRYFTENLEEPIGNLQAGALLHFFVEEVGPAIYNLAIADAQSSLHARVA
ELDIDCHQAPFGYWKKTPVRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11591; Mature: 11460

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPACTPLDMRFTGESMAIELDKDVRDRAIASLQRYFTENLEEPIGNLQAGALLHFFVEEV
CCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GPAIYNLAIADAQSSLHARVAELDIDCHQAPFGYWKKTPVRKR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PACTPLDMRFTGESMAIELDKDVRDRAIASLQRYFTENLEEPIGNLQAGALLHFFVEEV
CCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GPAIYNLAIADAQSSLHARVAELDIDCHQAPFGYWKKTPVRKR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA