| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455275
Identifier: 126455275
GI number: 126455275
Start: 3909283
End: 3910350
Strand: Direct
Name: 126455275
Synonym: BURPS1106A_4005
Alternate gene names: NA
Gene position: 3909283-3910350 (Clockwise)
Preceding gene: 126452150
Following gene: 126454114
Centisome position: 98.01
GC content: 71.82
Gene sequence:
>1068_bases ATGACGCCGACCCTCGACGAAACCGCGCTGCCGCCCGCCGACGCGCTCGCCTACCCCGGCACGCTGCTTTCGCCGGACGG GCGGCTCGTCGCCCCCTACGATCTCGAACGCCCGGGCGCCGACGCGCGCGGCCACGTCGGCGCGGCGGCCCGCGCCGGGC TGTTGCACGCGGCAAGCGGCCCGTTCACGCTGGATTACGCGACGTTGTCGACGGTTCACGTGATCAACGGGATGGGCGTC GCGCTCGGCGATTCGGTGGTCGGGCTGACCGCGCTCGCGGCGATCAAGGCGCGGCATCCGCATGTGCATTTCGTGTTGTA CCGCCCCGCGCACGCGCCCGCGTACGTCGACGCGCTGTACCGGCTCGCGGCCGACGCAATCGCGCCGATCCGCGCGCTGC CGTGGCCCGCGGCGGAGCTGCCGGCGCGCGACACGCGCATCGACCTCGGCAATCACCTGTACTGGCCCGCATTCGCGGCG CGGCCGATGATCGACTTCTTTCTGGCGTCGCTCGGCGTGCCGCCCGAATCGATCCCGGCCGACGCGAAATGCAACCGCTG GCTCGCGCGGTTGACGCTGCCCCCGCTGCCGCCCGAGTGGCGCGACCGGCCGTACGCGCTGTTCTGCCCGCAGGCGAGCA CGCCGCTGCGCAGCATCCCGGCCGCGCAACGCGCGGCGCTCGTCGAGCGGCTCGCGCGCACCTATCGGCTGCCCGTGCTC GGCTTCGGGCCGATCGATCATCCGGACTATGTCGACGTGAGCGGCCACTCAGCCGATACCGCGCAGTTCGTCAGCTGGGT CGGGCGGGCGCGCGTCGCGCTCTGCTCGGACACGTCGGCCGTGCACATCGCGGCCGGCTTCGACGTGCCGACGCTCGCGT GCTTTTCGAGCATCGCGCCCGAGTTGCGGGTGCGCGATTACCCGCTTTGCACGGCGATCGAACTCGATATGCCGGAGATG CTGCGCAATCGCCACAAAAGCGATGCGGCGAACGACATCGCGCAGGTCGACGCCGCGTATCGGCGCATCGATTGGGACGC GATCGCCTGGCCACCGGCGCGGGAATGA
Upstream 100 bases:
>100_bases CAAGACGCGTGCACGCCCGCCGCGACGCTCGAGCAGGTGCGCGAGCAAGGGCTGCGCGCGCGTCGCGCTTGACGATACGA CCGATGAACGCTCCCATGCG
Downstream 100 bases:
>100_bases GCATCGGCGCGGCGGGGTGGCGGTCTCGCGCGGTATGCGGCCGCCGCCGCAGCGTCGCCGGCTGGCCGGTGAACGCCGGC GGCCGGTGCGCCGCGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASGPFTLDYATLSTVHVINGMGV ALGDSVVGLTALAAIKARHPHVHFVLYRPAHAPAYVDALYRLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAA RPMIDFFLASLGVPPESIPADAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL GFGPIDHPDYVDVSGHSADTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAPELRVRDYPLCTAIELDMPEM LRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE
Sequences:
>Translated_355_residues MTPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASGPFTLDYATLSTVHVINGMGV ALGDSVVGLTALAAIKARHPHVHFVLYRPAHAPAYVDALYRLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAA RPMIDFFLASLGVPPESIPADAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL GFGPIDHPDYVDVSGHSADTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAPELRVRDYPLCTAIELDMPEM LRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE >Mature_354_residues TPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASGPFTLDYATLSTVHVINGMGVA LGDSVVGLTALAAIKARHPHVHFVLYRPAHAPAYVDALYRLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAAR PMIDFFLASLGVPPESIPADAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVLG FGPIDHPDYVDVSGHSADTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAPELRVRDYPLCTAIELDMPEML RNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38365; Mature: 38234
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASG CCCCCCCCCCCCHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCCCHHHHHCEEEECCC PFTLDYATLSTVHVINGMGVALGDSVVGLTALAAIKARHPHVHFVLYRPAHAPAYVDALY CEEEEHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH RLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAARPMIDFFLASLGVPPESIPA HHHHHHHHHHHHCCCCHHHCCCCCCEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCCCC DAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL CCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEE GFGPIDHPDYVDVSGHSADTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAP ECCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHCCC ELRVRDYPLCTAIELDMPEMLRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE CCEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TPTLDETALPPADALAYPGTLLSPDGRLVAPYDLERPGADARGHVGAAARAGLLHAASG CCCCCCCCCCCHHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCCCHHHHHCEEEECCC PFTLDYATLSTVHVINGMGVALGDSVVGLTALAAIKARHPHVHFVLYRPAHAPAYVDALY CEEEEHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH RLAADAIAPIRALPWPAAELPARDTRIDLGNHLYWPAFAARPMIDFFLASLGVPPESIPA HHHHHHHHHHHHCCCCHHHCCCCCCEEECCCEEECCHHHHHHHHHHHHHHHCCCCCCCCC DAKCNRWLARLTLPPLPPEWRDRPYALFCPQASTPLRSIPAAQRAALVERLARTYRLPVL CCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEE GFGPIDHPDYVDVSGHSADTAQFVSWVGRARVALCSDTSAVHIAAGFDVPTLACFSSIAP ECCCCCCCCEEECCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHCCC ELRVRDYPLCTAIELDMPEMLRNRHKSDAANDIAQVDAAYRRIDWDAIAWPPARE CCEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA