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The map label for this gene is 126455274

Identifier: 126455274

GI number: 126455274

Start: 3508538

End: 3509518

Strand: Reverse

Name: 126455274

Synonym: BURPS1106A_3603

Alternate gene names: NA

Gene position: 3509518-3508538 (Counterclockwise)

Preceding gene: 126451495

Following gene: 126452806

Centisome position: 87.99

GC content: 72.78

Gene sequence:

>981_bases
ATGAATCAACTGATCGACACCCTCGGACGGCGCGCGGTGCTCATCGGCGTCGCGCTCGGCCTGGCCGCCTGCGCGGGCGG
CGGCGGCCCGCCGGGCGAGGCGCCGGCGACGCTGCCGCGCATCGTCGCGCATCGCGGCGGCGCGGCCGATGCGCCGGAGA
ACACACTCGATGCGATCCGGGCGGCGGTCGCGAATCGGGCGGACGCGATTTGGCTGACCGTCCAACTGAGCCGCGACGGC
GTGCCGGTGCTGTATCGGCCCGCCGATCTATCGGCGCTCACGCGCTCGAGCGGCCCGGTCGCCGGCCACACGGCCGCGCA
GCTCGCGCAGATGAACGCCGGCTGGCAATTCCGCGATGCGGGCGGGCGGTATCCGTATCGCGCGCGCCCGGTCGGCATTC
CGACGTTGCGCGACGCGCTGCGCGCGATTCCGCCCGCGATGCCGATCGTGCTCGACATGAAGGCGGTGCCCGCCGCGCCG
CAGGCGAAGGCCGTCGCGGACGTGCTGACGAGCGAGGCCGCGTGGCCGCGCGTGACGATCTATTCGACCGGTGCCGCTTA
TCAGACCGCGTTCGCCTCGTATCCGCAGGCACGGCTCTTCGAATCGCGCGATGCGACGCGCGGGCGGCTCGTCGACGTGC
TGCTCGGCGGCGCGTGCGAACGCGCGCCCGAGGCGCCTGCGACGGCGCCCATATGGACCGGCTTCGAAATGCATCGAAAC
ATGACGGTGAGCGAGCGCTTCACGCTCGGCGAAGGCGTATCGCCCGTGAAGGCGACGTTGTGGACGCCCGCGACCGTCGC
GTGCTTCAGGCGGCGCGCGGACGTGCGGATTCTCGCGATCGCGGTGAACGACGCCGACGATTACCGCACGGCCGCGTGCC
TCGGGCTCGATGCGGTGCTCGCGGATTCGCCGCGCGAGATGGCGGAAATCCGGTCGGCGCTGCGGGCGCGGCCGTTGCGG
TGCGAGACGGGGGCGCGATAG

Upstream 100 bases:

>100_bases
GCCCGACGGCATCTTAACCGCGGCGAAGCGCTGAAGAAACTCCGTCGCGTATCGTCGACCCAAAGGGAGGGAATGCATTT
TCAACGAAGGAACGAAATCC

Downstream 100 bases:

>100_bases
GCAGGCGACGGGGCGAAACGGGTTGGCCGCCCGGCGATCGCGCGGTTCGTCTTCACGCGGCTCCCCTCACCGGATAGCGG
GCGTGCGCGCGGTTCCATAG

Product: glycerophosphoryl diester phosphodiesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MNQLIDTLGRRAVLIGVALGLAACAGGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRAAVANRADAIWLTVQLSRDG
VPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAGGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAP
QAKAVADVLTSEAAWPRVTIYSTGAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRN
MTVSERFTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLADSPREMAEIRSALRARPLR
CETGAR

Sequences:

>Translated_326_residues
MNQLIDTLGRRAVLIGVALGLAACAGGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRAAVANRADAIWLTVQLSRDG
VPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAGGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAP
QAKAVADVLTSEAAWPRVTIYSTGAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRN
MTVSERFTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLADSPREMAEIRSALRARPLR
CETGAR
>Mature_326_residues
MNQLIDTLGRRAVLIGVALGLAACAGGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRAAVANRADAIWLTVQLSRDG
VPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAGGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAP
QAKAVADVLTSEAAWPRVTIYSTGAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRN
MTVSERFTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLADSPREMAEIRSALRARPLR
CETGAR

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: NA

Molecular weight: Translated: 34436; Mature: 34436

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLIDTLGRRAVLIGVALGLAACAGGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIR
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
AAVANRADAIWLTVQLSRDGVPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDA
HHHHCCCCEEEEEEEECCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECC
GGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQAKAVADVLTSEAAWPRVTI
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEE
YSTGAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRN
EECCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHCCCCCCCCCCEECCHHHHCC
MTVSERFTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVL
CCHHHCEECCCCCCCHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH
ADSPREMAEIRSALRARPLRCETGAR
CCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNQLIDTLGRRAVLIGVALGLAACAGGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIR
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
AAVANRADAIWLTVQLSRDGVPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDA
HHHHCCCCEEEEEEEECCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECC
GGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQAKAVADVLTSEAAWPRVTI
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEE
YSTGAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRN
EECCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHCCCCCCCCCCEECCHHHHCC
MTVSERFTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVL
CCHHHCEECCCCCCCHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH
ADSPREMAEIRSALRARPLRCETGAR
CCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]