| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455266
Identifier: 126455266
GI number: 126455266
Start: 1575279
End: 1576058
Strand: Direct
Name: 126455266
Synonym: BURPS1106A_1618
Alternate gene names: NA
Gene position: 1575279-1576058 (Clockwise)
Preceding gene: 126451662
Following gene: 126454935
Centisome position: 39.5
GC content: 54.87
Gene sequence:
>780_bases GTGGGGGCGGATGATTATCATAGGATTGGCTATCTTATGCCAATGCCAGTTCCATTTATATTCTTTTTAATTTTTTACTA TAAGATCTTAAATAAAGATTATTTTTCATTTGTTTATTATCCAATACGTTTCAATCGCCGGACTCGTAAGGTTTATGTGT TTCGCGAGAAACGCGATGGTGGTATTTTGGCAGTGCCCTGGGACTCGGTCTTTTTCCACATCGGACGCGGCACCGACATG AAGTTCCTTCGCGACATCCGCGGCGAGGTGATGGAGGGCGACATCGTCAAGGATACGTTCGCACTGGGTCACTGCGCGGA AAGCGACCGCCCGGTGCTGGAAATGTGGGAATTCATCCGTCGCTACATGGAAGAGGGGCCGGAAGCCGTGGCGGAAGTGC CGCTGGACAAGTATGTGGAACTATCCGTCGCACCGACGCTGAAGAACTGCCTGATCTCCGCCGTCGGCTTCACGAATGCG ACGACACCGACGAAGCGTATCCTGCTGTCCCCGTTCATCGGTTTGTTCACGCTGGTGCGATGGCTCGTCTTCAAAACCTG CAAGGAGCCGCAATTCCCGCCGGAGATCGAAGCCGAATGCCGAGTGGAGCCGAACGATCCGAACGTCTGGCCGATTCCGG CGTCGATCGGTGAGTTTGCTGCGACGGTTCCGGGCTTCATCGAACGCGCGAGGGAAAAAGCGCAGCGCGGCCAAGCGCAG GACAATGCGGATCGGCAACCTCATCCCATGCGCAAGCGTCGCCGTCGACGTGCGCAATAG
Upstream 100 bases:
>100_bases CGATAGGCGTTTCTTGTATCGTGGAATGATGGGGACGTCTGTAATAACTGGCGGGTTTATTTTTTTTGCCGGAATGCTTG CGTGGTTGATTTTTGGGTAT
Downstream 100 bases:
>100_bases TCGTTCCGGTTATTCGAAGCGCAGCTGCGTTCGAAGCCGCCGCTCTGTGCGGACGCTGTCACATGCGGGAGTGCATGCCG GTGTAATGATTCCGTGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MGADDYHRIGYLMPMPVPFIFFLIFYYKILNKDYFSFVYYPIRFNRRTRKVYVFREKRDGGILAVPWDSVFFHIGRGTDM KFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIRRYMEEGPEAVAEVPLDKYVELSVAPTLKNCLISAVGFTNA TTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFPPEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQ DNADRQPHPMRKRRRRRAQ
Sequences:
>Translated_259_residues MGADDYHRIGYLMPMPVPFIFFLIFYYKILNKDYFSFVYYPIRFNRRTRKVYVFREKRDGGILAVPWDSVFFHIGRGTDM KFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIRRYMEEGPEAVAEVPLDKYVELSVAPTLKNCLISAVGFTNA TTPTKRILLSPFIGLFTLVRWLVFKTCKEPQFPPEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQ DNADRQPHPMRKRRRRRAQ >Mature_258_residues GADDYHRIGYLMPMPVPFIFFLIFYYKILNKDYFSFVYYPIRFNRRTRKVYVFREKRDGGILAVPWDSVFFHIGRGTDMK FLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIRRYMEEGPEAVAEVPLDKYVELSVAPTLKNCLISAVGFTNAT TPTKRILLSPFIGLFTLVRWLVFKTCKEPQFPPEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQD NADRQPHPMRKRRRRRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30222; Mature: 30091
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADDYHRIGYLMPMPVPFIFFLIFYYKILNKDYFSFVYYPIRFNRRTRKVYVFREKRDG CCCCCHHHCCEECCCCHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCEEEEEEEEECCCC GILAVPWDSVFFHIGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIR CEEEEEHHHEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH RYMEEGPEAVAEVPLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVR HHHHHCHHHHHHCCHHHHEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH WLVFKTCKEPQFPPEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQ HHHHHHHCCCCCCCCCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC DNADRQPHPMRKRRRRRAQ CCCCCCCCHHHHHHHHCCC >Mature Secondary Structure GADDYHRIGYLMPMPVPFIFFLIFYYKILNKDYFSFVYYPIRFNRRTRKVYVFREKRDG CCCCHHHCCEECCCCHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCEEEEEEEEECCCC GILAVPWDSVFFHIGRGTDMKFLRDIRGEVMEGDIVKDTFALGHCAESDRPVLEMWEFIR CEEEEEHHHEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH RYMEEGPEAVAEVPLDKYVELSVAPTLKNCLISAVGFTNATTPTKRILLSPFIGLFTLVR HHHHHCHHHHHHCCHHHHEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH WLVFKTCKEPQFPPEIEAECRVEPNDPNVWPIPASIGEFAATVPGFIERAREKAQRGQAQ HHHHHHHCCCCCCCCCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC DNADRQPHPMRKRRRRRAQ CCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA