| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455265
Identifier: 126455265
GI number: 126455265
Start: 2942446
End: 2943015
Strand: Direct
Name: 126455265
Synonym: BURPS1106A_3005
Alternate gene names: NA
Gene position: 2942446-2943015 (Clockwise)
Preceding gene: 126451548
Following gene: 126452928
Centisome position: 73.77
GC content: 72.28
Gene sequence:
>570_bases TTGGCCGCCGCCGTGCTCGGCTGCATCGTGCTGAGCGCGCCCCGCATCGCCGCCGCCGACGGCGACGATACCGCGCTCAC GAACCTCGTCGCGCTCGCGTCGCAGCGCCTCGCGCTCGCCGAACCCGTCGCTCACTGGAAGTGGCTCAACGGAAAACCGA TCTCGGATCCACCGCGCGAGGCAGCGCTCCTGGCCGACGTCGAGCAACGCGCGACGGCGAACGGCGTCGATCCCGCATAC GCCCGCGCGTTCTTCGACGACCAGATCGCGGCGAGCAAGCAAGTGCAGAACGCGCTCTTCGCGACATGGCGCGCGACGCA CGGCCCGGAAGGCCCCGCGCCCGACTTGGCGACGAGCACGCGGCCGCAGCTCGACCGCCTCACGCAATCGCTGATCGCCG CGCTCGCGCGTGTCGCCCCGCTGCGCGACGCGCCGGATTGTCCGTCACGCCTCGCGCGCAGCGTCTCGAACTGGAAGACC TTGACACGCTACGACTCCGGCCGCGAGGACGCGCTCGGCACCGCGCTGTCGCACGTCTGCACGGCGGGCAGCACCAGCGC GGTCGGCTAG
Upstream 100 bases:
>100_bases CTGCGCAACGTCTTCGCTTATTCTTCTGTTTTTTCCATCGCCCGGCTCTCGCGTGCCGGCATCGCCATCGTTCACCATGA AACAGTCGCTTCGTGCAAGC
Downstream 100 bases:
>100_bases CGCCGGCTCGTCGCCGACGACAGGCGGGCGAGCCGGCCTTTGCGTCCGCAGCGCGGGGATGGAAGGAACGCGTTGAACAC GGGTAGCGCGCGTGGCGATT
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate Mutase Protein; Monofunctional Chorismate Mutase; Secreted Chorismate Mutase; Chorismate Mutase Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MAAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPREAALLADVEQRATANGVDPAY ARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKT LTRYDSGREDALGTALSHVCTAGSTSAVG
Sequences:
>Translated_189_residues MAAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPREAALLADVEQRATANGVDPAY ARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKT LTRYDSGREDALGTALSHVCTAGSTSAVG >Mature_188_residues AAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPREAALLADVEQRATANGVDPAYA RAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKTL TRYDSGREDALGTALSHVCTAGSTSAVG
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19819; Mature: 19688
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPRE CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH AALLADVEQRATANGVDPAYARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATST HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKTLTRYDSGREDALGTALSHVC CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TAGSTSAVG HCCCCCCCC >Mature Secondary Structure AAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPRE HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH AALLADVEQRATANGVDPAYARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATST HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKTLTRYDSGREDALGTALSHVC CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TAGSTSAVG HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA