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The map label for this gene is pbpG [H]

Identifier: 126455216

GI number: 126455216

Start: 2621647

End: 2622756

Strand: Reverse

Name: pbpG [H]

Synonym: BURPS1106A_2663

Alternate gene names: 126455216

Gene position: 2622756-2621647 (Counterclockwise)

Preceding gene: 126452790

Following gene: 126453595

Centisome position: 65.76

GC content: 67.66

Gene sequence:

>1110_bases
TTGTTTGCACCGCTCAGGATGATGCAGAGCGTGGCGCTCGGCACCGCCGTCTCGGTTGCCGTCTCGCTGATGGTGGCGAC
GGCCGCCGTCGCGCCCGCGGACGCGTTCGCCGCCACCGCCAAGACCGCGCAGAGCGCGAAAGGCAAGAAGAGCGCGGCGA
AGAAATCGCTGCGCGCCGCTTCGTCGAGCGCTGAGCCGCGCGCGAAGGGCGCGCGCAAGCGCGTGACCTACGTGTCGAAC
GGCCGGCACCGCAGCGGCGTGCGCCGCGTCGCGTTCCAGCCGCGGCCGCCGTCGGTCGGCCAGGCGTTCGGCCTGCATGA
GACGCCCGATTCGCTCGCGCTGCGCTCGAGCGTCGCGTACGTCGTCGATCAGAACACGTCCGAGCCGCTCTTCGACAAGA
ATTCGCACGCGGTCGTGCCGATCGCGTCGATCACGAAGCTGATGACCGCGATGGTCGTCCTCGACTCGAAGTCGCCGCTC
ACCGATCAGATCGACGTGACCGACGAGGATCGCGACTACGAGAAGGGCACGGGCTCGCGCCTGTCGGTCGGCTCGGTGCT
GTCGCGCGAGGACATGCTGCACATCGCGCTGATGGCGTCGGAGAACCGCGCGGCGGCCGCGCTGTCGCGCTACTACCCGG
GCGGCCGTCCGGCGTTCATCGCGGCGATGAACGCGAAGGCGAAGTCGCTCGGCATGACCGATACGCACTTCGAGAACTCG
ACGGGCCTGTCCAGCCAGAACGTATCGAGCGCGCGCGATCTCGTGAAGATGGTGAACGCGGCGTACCAGTACCCGCTCAT
CCGCAAGTTCTCGACCGATCGCAGCTACGAGGTCAACACCGGCAAGCGGACGCTCGCGTACAACAGCACGAATGCGCTCG
TGCGCAATCCGTCGTGGGACATCGGCCTGCAGAAGACGGGCTTCATCAACGAGGCGGGCGAGTGCCTCGTGATGCAGACG
ACGATTCACGGCCGCCCGATCGTGATGGTGCTGCTCGATTCGTTCGGCAAGTATTCGCGCTTCGCCGATGCGTCGCGCGT
GCGCAACTGGCTCGACAACGGCGGCGGCGAGCGCCTGACGGCGGCGAATACGTCGACGGGCGGCACCTGA

Upstream 100 bases:

>100_bases
AACGAAAATCGGTAAGTGCCTAATATTGCTTATTTTTTCAGCTTTTACTACACTTGCGGAAACCTCCCGCCGTTTTGTTC
GGACCCTAATGAAAGCCCAA

Downstream 100 bases:

>100_bases
TCGGCCGCGTGGCCGTCCGCTCCCGGCGCGCCGCTCAGCAAAAGCCCCGCATTCGCGGGGCTCAGATTGCTGACAAACCC
TCGCCAAGTGGGGGTTTTTG

Product: D-alanyl-D-alanine carboxypeptidase family protein

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MFAPLRMMQSVALGTAVSVAVSLMVATAAVAPADAFAATAKTAQSAKGKKSAAKKSLRAASSSAEPRAKGARKRVTYVSN
GRHRSGVRRVAFQPRPPSVGQAFGLHETPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSPL
TDQIDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMNAKAKSLGMTDTHFENS
TGLSSQNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVNTGKRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQT
TIHGRPIVMVLLDSFGKYSRFADASRVRNWLDNGGGERLTAANTSTGGT

Sequences:

>Translated_369_residues
MFAPLRMMQSVALGTAVSVAVSLMVATAAVAPADAFAATAKTAQSAKGKKSAAKKSLRAASSSAEPRAKGARKRVTYVSN
GRHRSGVRRVAFQPRPPSVGQAFGLHETPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSPL
TDQIDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMNAKAKSLGMTDTHFENS
TGLSSQNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVNTGKRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQT
TIHGRPIVMVLLDSFGKYSRFADASRVRNWLDNGGGERLTAANTSTGGT
>Mature_369_residues
MFAPLRMMQSVALGTAVSVAVSLMVATAAVAPADAFAATAKTAQSAKGKKSAAKKSLRAASSSAEPRAKGARKRVTYVSN
GRHRSGVRRVAFQPRPPSVGQAFGLHETPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSPL
TDQIDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMNAKAKSLGMTDTHFENS
TGLSSQNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVNTGKRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQT
TIHGRPIVMVLLDSFGKYSRFADASRVRNWLDNGGGERLTAANTSTGGT

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=238, Percent_Identity=52.1008403361345, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI87082022, Length=272, Percent_Identity=26.4705882352941, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787062, Length=261, Percent_Identity=26.0536398467433, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 39476; Mature: 39476

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPLRMMQSVALGTAVSVAVSLMVATAAVAPADAFAATAKTAQSAKGKKSAAKKSLRAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SSSAEPRAKGARKRVTYVSNGRHRSGVRRVAFQPRPPSVGQAFGLHETPDSLALRSSVAY
CCCCCCHHHCCHHEEEEECCCCCCCCCHHEEECCCCCCCCCCCCCCCCCHHHHHHHHEEE
VVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSPLTDQIDVTDEDRDYEKGTGSR
EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
LSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMNAKAKSLGMTDTHFENS
EEHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCCCC
TGLSSQNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVNTGKRTLAYNSTNALVRNPSWD
CCCCCCCHHHHHHHHHHHHHHHCCCHHHECCCCCCEEECCCCEEEEECCCCCEEECCCCC
IGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRFADASRVRNWLDNGGGERLT
CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEE
AANTSTGGT
ECCCCCCCC
>Mature Secondary Structure
MFAPLRMMQSVALGTAVSVAVSLMVATAAVAPADAFAATAKTAQSAKGKKSAAKKSLRAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SSSAEPRAKGARKRVTYVSNGRHRSGVRRVAFQPRPPSVGQAFGLHETPDSLALRSSVAY
CCCCCCHHHCCHHEEEEECCCCCCCCCHHEEECCCCCCCCCCCCCCCCCHHHHHHHHEEE
VVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSPLTDQIDVTDEDRDYEKGTGSR
EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
LSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMNAKAKSLGMTDTHFENS
EEHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCCCCCCC
TGLSSQNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVNTGKRTLAYNSTNALVRNPSWD
CCCCCCCHHHHHHHHHHHHHHHCCCHHHECCCCCCEEECCCCEEEEECCCCCEEECCCCC
IGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRFADASRVRNWLDNGGGERLT
CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEE
AANTSTGGT
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]