| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455210
Identifier: 126455210
GI number: 126455210
Start: 3161709
End: 3162653
Strand: Reverse
Name: 126455210
Synonym: BURPS1106A_3254
Alternate gene names: NA
Gene position: 3162653-3161709 (Counterclockwise)
Preceding gene: 126454048
Following gene: 126451978
Centisome position: 79.3
GC content: 66.03
Gene sequence:
>945_bases ATGAAAGTATTCATCCTTCACCCGGGGAAGGCGAATTACCCGGAAATCGCCGCGTACCGCGACTTTCTCGGCCCGCGCGG CTTCGACGTCCACGATGGCGACGCGAGCGCGTATGCGCGGTTCGATGGGCGACACGATTGCATTCTGTGGTGCATCATGG GCTTTTATCGCGCGTTGCCGCCCGCGCGGTTCGTGATTCACGATTACCGGTCGCTGTCGGTCGGCCGGCTCGCGGCGCTC AAGGATACGGTCAAGCGTGCGTGGAACGCAAAGCCGGCTCTGCGGATTTTCCAGAACGAGCGCATGCGCGACGCGATGGC GTTTCGCGACGGCATACCGTCGCTGCTGCTGCCGATGGGCGTGCCGGACTGGATCTTCGGGATCGCGAACGAACCGGCGG GCGCGGGCCCGGCCGGTCGGTTCTGCTACATCGGCGAGATGAGCCGCGAGCGCGGCTTCCACAAGGTGTTGGCCGCGTAT CGTGCCGCGCCGCGCACGGCGCGCGACTCGCTCGTGCTCGTCGGGCAGCCGGAGCCGGAGATCTACGAGGCGTTCAGACA TGTCGAGGGCCTCGTGTTCGTCGGCCGCGTGCCGCAGCGCGATGCGCTCAAGATCGTGCAACGCTCCGACTATGCGGTTT GCTATTTTCCGTACCACCGTCCACACCGCTTCCAGACGCCGACGAAGCTGCTCGAGTACGCGGCGCTCGGCAAGAAGATC ATTTGCAACGACGCGCCGTCGAATGTCGATGCGATCAGCGCGCTCGGCATCCGCTCGCATGTCACGGGCGCGGCGATATT CGACGAGTTGCTGCCGCTCGCGCAGGTGCGTGCGCAGCGCAACGATCCCGCGCGGCTGAAGCGCCTCGAATGGACGGCCG TGATCGCGCGATCGGGCGTGCTCGCGCATATCGAGGCGGCGGCCTCGATGCGAGGTGCGCGATGA
Upstream 100 bases:
>100_bases TCGGCGCGGGCGCCGTGCTGCTGCGGGACGTGCCGGACGGCGGCGTCGCGGTGGGCGTGCCGGCTCGCGTGCTGGAGAAC GGGAAGGAGCAGAGCGCAGC
Downstream 100 bases:
>100_bases CGATCGATATCGCCGGCGGCCGGCATCGCGATGCGTTGCCGAAGCGCGATGCCGGGGCCGGGGGCGCGCGCGCATGAAGA TCGTGCAGGTCCTCGAATCG
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALPPARFVIHDYRSLSVGRLAAL KDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMGVPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAY RAAPRTARDSLVLVGQPEPEIYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI ICNDAPSNVDAISALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGVLAHIEAAASMRGAR
Sequences:
>Translated_314_residues MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALPPARFVIHDYRSLSVGRLAAL KDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMGVPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAY RAAPRTARDSLVLVGQPEPEIYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI ICNDAPSNVDAISALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGVLAHIEAAASMRGAR >Mature_314_residues MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALPPARFVIHDYRSLSVGRLAAL KDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMGVPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAY RAAPRTARDSLVLVGQPEPEIYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI ICNDAPSNVDAISALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGVLAHIEAAASMRGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35097; Mature: 35097
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALP CEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCC PARFVIHDYRSLSVGRLAALKDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMG CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC VPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAYRAAPRTARDSLVLVGQPEPE CHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH IYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI HHHHHHHHCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEE ICNDAPSNVDAISALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGV EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH LAHIEAAASMRGAR HHHHHHHHHCCCCC >Mature Secondary Structure MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALP CEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCC PARFVIHDYRSLSVGRLAALKDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMG CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC VPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAYRAAPRTARDSLVLVGQPEPE CHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH IYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI HHHHHHHHCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEE ICNDAPSNVDAISALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGV EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH LAHIEAAASMRGAR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA