| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126455166
Identifier: 126455166
GI number: 126455166
Start: 338228
End: 338857
Strand: Direct
Name: 126455166
Synonym: BURPS1106A_0370
Alternate gene names: NA
Gene position: 338228-338857 (Clockwise)
Preceding gene: 126454201
Following gene: 126453316
Centisome position: 8.48
GC content: 72.54
Gene sequence:
>630_bases ATGCGCTCATGCAGCAAATCGACGTGGCCGCCGCGGCTCGTCACGGCACCCGGCCTGCACGGCAGCGAAGGCGCGCACTG GCAGACCTGGCTCGAGAGGCAGTTCGCGCGTGCGCTGCGCGTCGAGCAGGACGACTGGGACGCGCCGCATGTCGAGCGCT GGGCGCAGAAGGTGCGCGATCTGCTCGCGCGCGAGCGCGGGCCGTTCGTGATCGCCGCGCACAGCTTCGGCTGCCTCGCG ACCGCGCATGCGCTCGCGCAGGCCGCGCAGACGCGGGCGGCGGACGTCGTCGGCGTGCTGTTCGTCGCGCCGGCGAATCC GCGCAAGTTCGCGTTCGCGGGCGATTTCGACGCGCGGCGCCTGAACGTGCCGTCGATCGTGGTCGGCAGCGAAAGCGATC CATGGATGACGCTCGCCGACGCGCGCGAGTTCGCGCAACGGCTCGGCAGCGCGTTCGTCAATCTCGGCGACGCGGGGCAC ATCAACACCGCGGCGGGTTACGGTCCGTGGCCGCGCGCGAAATACTTCGTCGACACGCTCGTGCACTGCGCGGCGCCGCT CAGGTTGCGCGACGACGATGCGCCGGCGTCCGGCGCGCCCGCGCGGCAGCCGCTCGTGACGGCCGCTTGA
Upstream 100 bases:
>100_bases GCGCCGCAAAGCGAGGAAATGCAAAGCACAAAAAATTGGTTCGCCGCGCGCGGCGCGCACGCGACAATCGGCGCCAGGCT TGCAGCTTCGCGAGGGACAC
Downstream 100 bases:
>100_bases CGTCGTTCGACGGGCTGCATCCGCTCTGTCAGGCTGCTCGCGTGACCTGCTCGAGCGCGATGCGCGTCGCATGCGTGAGC GGCTGCGGCAGATCGTCGAG
Product: putative hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MRSCSKSTWPPRLVTAPGLHGSEGAHWQTWLERQFARALRVEQDDWDAPHVERWAQKVRDLLARERGPFVIAAHSFGCLA TAHALAQAAQTRAADVVGVLFVAPANPRKFAFAGDFDARRLNVPSIVVGSESDPWMTLADAREFAQRLGSAFVNLGDAGH INTAAGYGPWPRAKYFVDTLVHCAAPLRLRDDDAPASGAPARQPLVTAA
Sequences:
>Translated_209_residues MRSCSKSTWPPRLVTAPGLHGSEGAHWQTWLERQFARALRVEQDDWDAPHVERWAQKVRDLLARERGPFVIAAHSFGCLA TAHALAQAAQTRAADVVGVLFVAPANPRKFAFAGDFDARRLNVPSIVVGSESDPWMTLADAREFAQRLGSAFVNLGDAGH INTAAGYGPWPRAKYFVDTLVHCAAPLRLRDDDAPASGAPARQPLVTAA >Mature_209_residues MRSCSKSTWPPRLVTAPGLHGSEGAHWQTWLERQFARALRVEQDDWDAPHVERWAQKVRDLLARERGPFVIAAHSFGCLA TAHALAQAAQTRAADVVGVLFVAPANPRKFAFAGDFDARRLNVPSIVVGSESDPWMTLADAREFAQRLGSAFVNLGDAGH INTAAGYGPWPRAKYFVDTLVHCAAPLRLRDDDAPASGAPARQPLVTAA
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22715; Mature: 22715
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSCSKSTWPPRLVTAPGLHGSEGAHWQTWLERQFARALRVEQDDWDAPHVERWAQKVRD CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LLARERGPFVIAAHSFGCLATAHALAQAAQTRAADVVGVLFVAPANPRKFAFAGDFDARR HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCE LNVPSIVVGSESDPWMTLADAREFAQRLGSAFVNLGDAGHINTAAGYGPWPRAKYFVDTL ECCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH VHCAAPLRLRDDDAPASGAPARQPLVTAA HHHHCCCEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSCSKSTWPPRLVTAPGLHGSEGAHWQTWLERQFARALRVEQDDWDAPHVERWAQKVRD CCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LLARERGPFVIAAHSFGCLATAHALAQAAQTRAADVVGVLFVAPANPRKFAFAGDFDARR HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCE LNVPSIVVGSESDPWMTLADAREFAQRLGSAFVNLGDAGHINTAAGYGPWPRAKYFVDTL ECCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH VHCAAPLRLRDDDAPASGAPARQPLVTAA HHHHCCCEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA