| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455150
Identifier: 126455150
GI number: 126455150
Start: 3926496
End: 3926888
Strand: Reverse
Name: 126455150
Synonym: BURPS1106A_4023
Alternate gene names: NA
Gene position: 3926888-3926496 (Counterclockwise)
Preceding gene: 126452302
Following gene: 126453432
Centisome position: 98.46
GC content: 72.01
Gene sequence:
>393_bases GTGGCGAACGGCTCACAGGCGCAGGCGTGCGATGCGCTCGAACAGTGCCTCGGCGCGTGCTTCGACGCCGGCGCCGTGAC CGCTGCGGCGCTGGCCGCGTCGCAGCGGCAGGCGCGCGACATGTGGGCGCTGCGCGAAGGGCTCGCGATCGATGCGCTGC CGCACCTGCTGAATTTCGACATGAGCCTGCCCATGGCTGGACTGGACACGTTCGCCGCGTGCTGCGACGCCGCGCTTCGC GCACACGGGCCGCATGCCGCGTGTCTGTGCGTCGGCATGCCGGCGACGGCGACGTGCACGTCGGCGTGTCGCTCGCCGAT TTGCCCGCGTCCGGCGCGGACAGCGTCGAGCGCGTTGTCTACGGGATCGTGCGCGAGATGGGCGGACCGATAG
Upstream 100 bases:
>100_bases AGGCGATGCGGCCCGCGTTCTATCGCTGCGTCGCCGCGCACGCGCCGGCGCGGCGGCGCCGTTCGACGCGTACGGCAGCT TCGCGGCGCTGATCGAATGC
Downstream 100 bases:
>100_bases CGGCCGAGCACGGCATCGGTGCGCTCAAGCGGCCGTTTCCCGGTTACGCGCGCAGCACCGCCGAGATCGCCGTGATGCGG GCGATGAAGGCGGCGTTCGA
Product: FAD linked oxidase
Products: NA
Alternate protein names: FAD/FMN-Containing Dehydrogenases; FAD Linked Oxidase-Like; FAD Linked Oxidase
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFDMSLPMAGLDTFAACCDAALR AHGPHAACLCVGMPATATCTSACRSPICPRPARTASSALSTGSCARWADR
Sequences:
>Translated_130_residues MANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFDMSLPMAGLDTFAACCDAALR AHGPHAACLCVGMPATATCTSACRSPICPRPARTASSALSTGSCARWADR >Mature_129_residues ANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFDMSLPMAGLDTFAACCDAALRA HGPHAACLCVGMPATATCTSACRSPICPRPARTASSALSTGSCARWADR
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13285; Mature: 13154
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 11.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFD CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC MSLPMAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSACRSPICPRPARTASSALS CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHC TGSCARWADR CCCCHHCCCC >Mature Secondary Structure ANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFD CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC MSLPMAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSACRSPICPRPARTASSALS CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHC TGSCARWADR CCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA