| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455147
Identifier: 126455147
GI number: 126455147
Start: 2957488
End: 2957982
Strand: Direct
Name: 126455147
Synonym: BURPS1106A_3024
Alternate gene names: NA
Gene position: 2957488-2957982 (Clockwise)
Preceding gene: 126452410
Following gene: 126453554
Centisome position: 74.15
GC content: 69.49
Gene sequence:
>495_bases ATGACGACGCGCTCCGAGCTCTTCCGGTTCCGGGCCGCGTGGCGCGGCGCGGCGCTTTGCGCGTGCGCGGCCGTGCTCGC GGCCTGCACGATCACGCTACCGCCGCCGCACGGCGCAGTGGTCGTACCGGGCGTGTCGTCGATGAGCGCGACCGAATATC GTGCGGCCATCGCGCAACGCATCGCCGACAGCAACTCGGATCGCATCCTGCACGGCACGCCGCAAGCGATGCTGCGCTCG CTCGTCGTCGTCGCGTTCACCGTCGATCGCAACGGGCAGCTCGTGAAGTCGGCCGTCTATCGCAGCAACGGCGACGACGA AGCCGAAGGCATCGCGCTCGCGTCGCTGCGCCGCGCCGCGCCGTTGCCGCCGCCGCCCGCGAAGATGCTCGACGGGCGCG GCCAGCTCGAGTTGATGGAAAGCTGGCTCTTCAACGACAACGGGCAATTCCAGTTGCGCACGAAAGCGGCGCCGCAAGCG CAGACGCTCAACTGA
Upstream 100 bases:
>100_bases AACCCTCTTCGGGAAAAGGGAGATCGTTTGTCCCGATGCACCGCGATACGCTCGGACCTATCATGAAATCGGCGTTCCGC CGATCTTCAGGGAGGCGATC
Downstream 100 bases:
>100_bases ACGCAAGCCCACACTCGCGCCCGAACGCACACGAACGCGCCTGCACGCCCTTCGCCGCGCCGCCGTGCCGTAGCGTCGTG ACGCCGTCGCACGCGGCTCG
Product: TonB domain-containing protein
Products: NA
Alternate protein names: NB Family Protein; NB-Like Protein; NB Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTTRSELFRFRAAWRGAALCACAAVLAACTITLPPPHGAVVVPGVSSMSATEYRAAIAQRIADSNSDRILHGTPQAMLRS LVVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALASLRRAAPLPPPPAKMLDGRGQLELMESWLFNDNGQFQLRTKAAPQA QTLN
Sequences:
>Translated_164_residues MTTRSELFRFRAAWRGAALCACAAVLAACTITLPPPHGAVVVPGVSSMSATEYRAAIAQRIADSNSDRILHGTPQAMLRS LVVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALASLRRAAPLPPPPAKMLDGRGQLELMESWLFNDNGQFQLRTKAAPQA QTLN >Mature_163_residues TTRSELFRFRAAWRGAALCACAAVLAACTITLPPPHGAVVVPGVSSMSATEYRAAIAQRIADSNSDRILHGTPQAMLRSL VVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALASLRRAAPLPPPPAKMLDGRGQLELMESWLFNDNGQFQLRTKAAPQAQ TLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17559; Mature: 17428
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRSELFRFRAAWRGAALCACAAVLAACTITLPPPHGAVVVPGVSSMSATEYRAAIAQR CCCHHHHHHHHHHHCHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCHHHHHHHHHHHH IADSNSDRILHGTPQAMLRSLVVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALASLRRAA HHCCCCCEEEECCHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC PLPPPPAKMLDGRGQLELMESWLFNDNGQFQLRTKAAPQAQTLN CCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure TTRSELFRFRAAWRGAALCACAAVLAACTITLPPPHGAVVVPGVSSMSATEYRAAIAQR CCHHHHHHHHHHHCHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCHHHHHHHHHHHH IADSNSDRILHGTPQAMLRSLVVVAFTVDRNGQLVKSAVYRSNGDDEAEGIALASLRRAA HHCCCCCEEEECCHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC PLPPPPAKMLDGRGQLELMESWLFNDNGQFQLRTKAAPQAQTLN CCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA