| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455143
Identifier: 126455143
GI number: 126455143
Start: 1923945
End: 1924442
Strand: Direct
Name: 126455143
Synonym: BURPS1106A_1955
Alternate gene names: NA
Gene position: 1923945-1924442 (Clockwise)
Preceding gene: 126453959
Following gene: 126454970
Centisome position: 48.24
GC content: 76.71
Gene sequence:
>498_bases ATGAGCGGCGCGGCGATCGAGGGCGCACGCGCCGCGTGCCGCGCGAGCGGGATGCACGGCGTGGCAAGCGCGGCGCGATC GATGCGCGATGCGTGCGATGTGTGTGACGGGGGCGATCCGGGCCCCGCGCACGATGCGACGACGATGAGCGTGGTGCCGG CGCGCCGGCGGCGCGGCAGCCGGGCGGCGTATGCGATGATGAGCGAAACGCGAACGATCGGCGGCGGAGCAAAGCGCGCG GGCGAACGGCGGTTGCGCCGGCGCGATGCGCGTCGCATGCGCGGCGTCGATCGCCTGGCAATCGATGTCATGCGCGGCGC GGTTCGCACCCGCCGGATGCCGGCGCCGCGTCGCATCGAACCGGCGCGGCAGCGGCGGGCGAACGAGACGCGATCGATCG CGGCCGCGCAGGCGGCGCGGCCGGCCCGACGCATGCCGGGCGCGCGCCGCCGAGGCTGCGTGCGCGAGCGGCGCGAGCCG TGCCCGCGTCGATCATGA
Upstream 100 bases:
>100_bases AGGCGATGCAGCGCGGCCTGTGGCAGGCGCCCGGCGCGCACCGCGACGCGATCGAGGGCTATCTGCTCGCGAGCGAGCAG CGGCTCGAAGGCGGCCGGCG
Downstream 100 bases:
>100_bases CGCGATACGCGCGGACGCCGCGCGCGCTTTGCCGGGCGCGGCAGGCGCATCCGATGCAACCGCCATCACCACGGGAACTG AATTGAACCCAACGATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSGAAIEGARAACRASGMHGVASAARSMRDACDVCDGGDPGPAHDATTMSVVPARRRRGSRAAYAMMSETRTIGGGAKRA GERRLRRRDARRMRGVDRLAIDVMRGAVRTRRMPAPRRIEPARQRRANETRSIAAAQAARPARRMPGARRRGCVRERREP CPRRS
Sequences:
>Translated_165_residues MSGAAIEGARAACRASGMHGVASAARSMRDACDVCDGGDPGPAHDATTMSVVPARRRRGSRAAYAMMSETRTIGGGAKRA GERRLRRRDARRMRGVDRLAIDVMRGAVRTRRMPAPRRIEPARQRRANETRSIAAAQAARPARRMPGARRRGCVRERREP CPRRS >Mature_164_residues SGAAIEGARAACRASGMHGVASAARSMRDACDVCDGGDPGPAHDATTMSVVPARRRRGSRAAYAMMSETRTIGGGAKRAG ERRLRRRDARRMRGVDRLAIDVMRGAVRTRRMPAPRRIEPARQRRANETRSIAAAQAARPARRMPGARRRGCVRERREPC PRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18073; Mature: 17942
Theoretical pI: Translated: 12.44; Mature: 12.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAAIEGARAACRASGMHGVASAARSMRDACDVCDGGDPGPAHDATTMSVVPARRRRGS CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC RAAYAMMSETRTIGGGAKRAGERRLRRRDARRMRGVDRLAIDVMRGAVRTRRMPAPRRIE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PARQRRANETRSIAAAQAARPARRMPGARRRGCVRERREPCPRRS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGAAIEGARAACRASGMHGVASAARSMRDACDVCDGGDPGPAHDATTMSVVPARRRRGS CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC RAAYAMMSETRTIGGGAKRAGERRLRRRDARRMRGVDRLAIDVMRGAVRTRRMPAPRRIE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PARQRRANETRSIAAAQAARPARRMPGARRRGCVRERREPCPRRS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA