| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455139
Identifier: 126455139
GI number: 126455139
Start: 3741497
End: 3742327
Strand: Direct
Name: 126455139
Synonym: BURPS1106A_3841
Alternate gene names: NA
Gene position: 3741497-3742327 (Clockwise)
Preceding gene: 126453980
Following gene: 126452603
Centisome position: 93.81
GC content: 70.76
Gene sequence:
>831_bases ATGAGCACCATCCACGTGACCATGGGCGGCTCCGCCGCCGCTTCTCTGCGCATCGCGCTCGCCGATGCGGGCCGCGACGA AGGCGTCGTCGAGCTGTTCGACGATCTGTCGGTCGGCCCGCTACGCGGCGCGGACGACTCGCCGGACGTGCGCGCCGCGT TCTGGGAGCGCGCGATCGGCGACGTCCAGCAGGATTGGACGGCCGGGCTGGGCGGCGACTTCGCGAAACTCGAGACGCTG GCGGCCGACACGGGCCAGGTCGTCGTCTGGCACGCGCAGAGCGTCGCGGATCAGTTGATGCTGCGGCGCGTCGCCTACCA CCTGCGCAATGCGCCGCAGCGCCTCAACGAGGTGCGGCTGTCGAGCGCGGACATCGACGATCCGCAATCGTGGGTGCGGC TGCGCGCCGATCAGGCGACCGCCACCGGCATCTTCTCGTCCGCGCAGTTGCGCGCCAAGCTGCCGGAGGCGGCGCCGATC TCGGTGCTGCGGATCAGCCGGCTCGCGCTCGAATGGCAGGAAGCGAAACAGGCGAATGCCGAGCTGCGCTACTGGATCTG CAACACGTTCAAGAGCGGCCATTACGCGGACATCGATGCGCTCGTGCTCGAGCACGCGCCCGACGAGTGGGGGCCCGCCG CGCGCACGATCGGCGCCGTGATGGCGTTCGCCGACCGCGGCCACCTGTTCGTCGGCGACGTGATCGCGTTCTGGCGCTGC CGCGAACTCGCGGCGGCCGGACGCATCGAGCTGCAAGGCGACGCTCGCTCGATCGACGACCTGAGAACGGCGACGCTGCG CGCGACACCCGCCGTGGCCCTTCCCCGCTAA
Upstream 100 bases:
>100_bases ACGCGCGGCCCGCCATCTCGCTTACACTAGGGGCCGCCTGCGGGCCGGACGCGCGACGCGCCGGCCCGCAGGCGGCTTTT CCCATGTTGACGACAAGCCA
Downstream 100 bases:
>100_bases CCCACCCGCATCACGCACCGAATCACATGGCCCGCACCCGCGCCCCCGACCACGAATCCCAGCGCGAGCAGATCCTCGAT CTCGCCGCCGCCAAGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSTIHVTMGGSAAASLRIALADAGRDEGVVELFDDLSVGPLRGADDSPDVRAAFWERAIGDVQQDWTAGLGGDFAKLETL AADTGQVVVWHAQSVADQLMLRRVAYHLRNAPQRLNEVRLSSADIDDPQSWVRLRADQATATGIFSSAQLRAKLPEAAPI SVLRISRLALEWQEAKQANAELRYWICNTFKSGHYADIDALVLEHAPDEWGPAARTIGAVMAFADRGHLFVGDVIAFWRC RELAAAGRIELQGDARSIDDLRTATLRATPAVALPR
Sequences:
>Translated_276_residues MSTIHVTMGGSAAASLRIALADAGRDEGVVELFDDLSVGPLRGADDSPDVRAAFWERAIGDVQQDWTAGLGGDFAKLETL AADTGQVVVWHAQSVADQLMLRRVAYHLRNAPQRLNEVRLSSADIDDPQSWVRLRADQATATGIFSSAQLRAKLPEAAPI SVLRISRLALEWQEAKQANAELRYWICNTFKSGHYADIDALVLEHAPDEWGPAARTIGAVMAFADRGHLFVGDVIAFWRC RELAAAGRIELQGDARSIDDLRTATLRATPAVALPR >Mature_275_residues STIHVTMGGSAAASLRIALADAGRDEGVVELFDDLSVGPLRGADDSPDVRAAFWERAIGDVQQDWTAGLGGDFAKLETLA ADTGQVVVWHAQSVADQLMLRRVAYHLRNAPQRLNEVRLSSADIDDPQSWVRLRADQATATGIFSSAQLRAKLPEAAPIS VLRISRLALEWQEAKQANAELRYWICNTFKSGHYADIDALVLEHAPDEWGPAARTIGAVMAFADRGHLFVGDVIAFWRCR ELAAAGRIELQGDARSIDDLRTATLRATPAVALPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30019; Mature: 29888
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIHVTMGGSAAASLRIALADAGRDEGVVELFDDLSVGPLRGADDSPDVRAAFWERAIG CCEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH DVQQDWTAGLGGDFAKLETLAADTGQVVVWHAQSVADQLMLRRVAYHLRNAPQRLNEVRL HHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHC SSADIDDPQSWVRLRADQATATGIFSSAQLRAKLPEAAPISVLRISRLALEWQEAKQANA CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC ELRYWICNTFKSGHYADIDALVLEHAPDEWGPAARTIGAVMAFADRGHLFVGDVIAFWRC EEEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHH RELAAAGRIELQGDARSIDDLRTATLRATPAVALPR HHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STIHVTMGGSAAASLRIALADAGRDEGVVELFDDLSVGPLRGADDSPDVRAAFWERAIG CEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH DVQQDWTAGLGGDFAKLETLAADTGQVVVWHAQSVADQLMLRRVAYHLRNAPQRLNEVRL HHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHC SSADIDDPQSWVRLRADQATATGIFSSAQLRAKLPEAAPISVLRISRLALEWQEAKQANA CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC ELRYWICNTFKSGHYADIDALVLEHAPDEWGPAARTIGAVMAFADRGHLFVGDVIAFWRC EEEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHH RELAAAGRIELQGDARSIDDLRTATLRATPAVALPR HHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA