| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455089
Identifier: 126455089
GI number: 126455089
Start: 2538526
End: 2539926
Strand: Reverse
Name: 126455089
Synonym: BURPS1106A_2576
Alternate gene names: NA
Gene position: 2539926-2538526 (Counterclockwise)
Preceding gene: 126452187
Following gene: 126453674
Centisome position: 63.68
GC content: 72.38
Gene sequence:
>1401_bases ATGAGCACGACGACGGTTGCGATTATCGGTGCGGGGTTTTGCGGGGCGACGCTGGCGACGCATCTGCTGCGAAGGCCGCC GGTGCGGCCGATGCGGGTGCTGCTGATCAACCGGTCGGGCGCGATGGCGCGCGGCGTGGCGTACGGCACGCGCGCGCTCG GCCATCTGCTGAACGTGCCCGCCGGCCGGATGAGCGCGGTGGCCGGCGACGATGACGACTTCTATCGATATGCGAGCGGG CGCGATCCGCGCGTCGCGCGCGGCAGCTTCGTGCCGCGGCGGATCTACGGCGACTACCTCGAGGCGCGCCTGACCGAGGC GATCGAGCAGGCGCACGCGGGCATCGAATTTCGTAGCGTGGTGGGCAGCGCGGTGAGAATCGCGCCCGTCGACGGCGGCG CGCGCGGCGCGATCACGATGGACGGCGGCGCGGTGATCGAGGCCGACCGCGTCGTGCTGAGCAGCGGCAACGAAATGCGC CGCGATCCGTTCATCGCCGAATCGCAACGCAAGTTCTACGACAGCCATGCCTACGTTCGCGATCCATGGCGGCCGGGCGC GCTGCGCGGCATCGCGCCCGATACGCCGGTGCTGCTCGTGGGCAGCGGGCTCACGATGATGGACGTGGTGCTCGATTTGC GCGCCCGGGGCCACGCGGCGCCGATTCACGTGGTGTCGCGCCACGGGTTGATGCCGCTCGCGCACCGTGAGATGGACGCG CCGCCGTCCTACGACGATCGGCTGGCGGCCCGCATGCTCGCGCGCGCGGACGTGCGCCATTACGTGCGCGCGGTGCGCGA CGCGATTCGCCGAGGCGGCGACTGGCGAGACGTGATCGGTTCGCTGCGCGCGGCGACGCCGGCGCTGTGGCGCCAGTTGC CGAGCGACGAGCGCCGGCGCTTCCTGCGCCATGTCAGGCCGTACTGGGACGTGCATCGCCACCGCTGCGCGCCCGAGCCG GCCGCACGGCTGCAAGCGGAATTCGAGCGAGGCGGCGTCGCGGCCGTCGCGGGGCGGGTGACGGGCTACAGCGAGCATCC GAACGGCGTCGGCGTGACGGTGCGCCGGCGCGGCGCGGCCGTCGACGAGCGTCTCGAAGTGGGCGCGGTCGTCAACTGCA CGGGGCCGGCACCGGACTTCAGCGCGCGGGCGGGATCGCTGCTCGGCAACCTGTATGCGGACGGGCTGATCGTGCCGGAT GCGATCGGCATGGGGTTCGAGATCGCCGACGACGGCGCGGTGCTCGATCGCGACGGCTCGCCGTCGGCGTGGCTGCGTTA TGTCGGCCCGTTGCTGCAGGCGCGCGATTGGGAGGCGACGGCGGTGCCGGAACTGCGGCAGTACGTGCAGCGGCTCGCCG ATACGCTGCTCGCGCCGCGCGACGAACGGGCGCTGACCTAG
Upstream 100 bases:
>100_bases CGGCGGCGATGCGGCGGCGCGCGCGATCCGGAGGGGGCGACGAGCGAATGGACGTCGGGGAAGCGGGGCGTGCGGCACCA TCCAAACGAACGGGGAAGCA
Downstream 100 bases:
>100_bases TGGCGCGGAGCGGCGCGCATCCGCTTGCGGACGGTGGGCGGGCCGTCGTGCTTCAGGACGGGACGCATAAAATAGGATTG CATATGAATCAATCATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Beta-Lactamase Domain-Containing Protein; FAD-Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSTTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVPAGRMSAVAGDDDDFYRYASG RDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFRSVVGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMR RDPFIAESQRKFYDSHAYVRDPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA PPSYDDRLAARMLARADVRHYVRAVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRRFLRHVRPYWDVHRHRCAPEP AARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAAVDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPD AIGMGFEIADDGAVLDRDGSPSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT
Sequences:
>Translated_466_residues MSTTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVPAGRMSAVAGDDDDFYRYASG RDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFRSVVGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMR RDPFIAESQRKFYDSHAYVRDPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA PPSYDDRLAARMLARADVRHYVRAVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRRFLRHVRPYWDVHRHRCAPEP AARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAAVDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPD AIGMGFEIADDGAVLDRDGSPSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT >Mature_465_residues STTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVPAGRMSAVAGDDDDFYRYASGR DPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFRSVVGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMRR DPFIAESQRKFYDSHAYVRDPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDAP PSYDDRLAARMLARADVRHYVRAVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRRFLRHVRPYWDVHRHRCAPEPA ARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAAVDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPDA IGMGFEIADDGAVLDRDGSPSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT
Specific function: Unknown
COG id: COG4529
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50755; Mature: 50623
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVP CCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC AGRMSAVAGDDDDFYRYASGRDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFRSV CCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMRRDPFIAESQRKFYDSHAYVR HCCCEEEEECCCCCCEEEEECCCEEEEECEEEECCCCHHHCCCCCHHHHHHHHHCCCEEE DPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCC PPSYDDRLAARMLARADVRHYVRAVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHH FLRHVRPYWDVHRHRCAPEPAARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAA HHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCEEEEECCCCC VDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPDAIGMGFEIADDGAVLDRDGS HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEECCCCC PSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure STTTVAIIGAGFCGATLATHLLRRPPVRPMRVLLINRSGAMARGVAYGTRALGHLLNVP CCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC AGRMSAVAGDDDDFYRYASGRDPRVARGSFVPRRIYGDYLEARLTEAIEQAHAGIEFRSV CCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VGSAVRIAPVDGGARGAITMDGGAVIEADRVVLSSGNEMRRDPFIAESQRKFYDSHAYVR HCCCEEEEECCCCCCEEEEECCCEEEEECEEEECCCCHHHCCCCCHHHHHHHHHCCCEEE DPWRPGALRGIAPDTPVLLVGSGLTMMDVVLDLRARGHAAPIHVVSRHGLMPLAHREMDA CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCC PPSYDDRLAARMLARADVRHYVRAVRDAIRRGGDWRDVIGSLRAATPALWRQLPSDERRR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHH FLRHVRPYWDVHRHRCAPEPAARLQAEFERGGVAAVAGRVTGYSEHPNGVGVTVRRRGAA HHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCEEEEECCCCC VDERLEVGAVVNCTGPAPDFSARAGSLLGNLYADGLIVPDAIGMGFEIADDGAVLDRDGS HHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCEEECCCCCEECCCCC PSAWLRYVGPLLQARDWEATAVPELRQYVQRLADTLLAPRDERALT HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA