Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126455048

Identifier: 126455048

GI number: 126455048

Start: 3815409

End: 3816089

Strand: Reverse

Name: 126455048

Synonym: BURPS1106A_3910

Alternate gene names: NA

Gene position: 3816089-3815409 (Counterclockwise)

Preceding gene: 126453227

Following gene: 126454120

Centisome position: 95.68

GC content: 69.75

Gene sequence:

>681_bases
GTGAACATTTCTGCAGCCTTACCGCTTCATTTGCTCCATCGCAACGTGCTCGGCACGCTCGCGACGCACTCGCGCGCGCC
CGAGGGCTATCCGTATCCAACCGTGGTGCCGTATGCGGTCGACGCGCGGCACCGGCCGATCGTGCTCGTGAGCGGGCTCG
CCGAGCACACGCGCAATCTCGCGGCCGATCCGCGCGCCGGGTTTCTCGTCGTCGACGGCCTGGGGGACGCGGCGGGCGCG
TCGGACAGCGTGCTCGAGGCGGAGCGCGCCACGCTCGTCGGCCGCTTCGAGCCGGCCGGCGCCGATCCGCACGTGGTCGC
GCGTTATTTGCGCTATCACCCGGACGGCGAGCGCTATCTCGCGCTCGGCGACTTTACGTTCTGGGCGCTCGCGTGCGAGC
GGCTGCGCTATATCGGCGGATTCGGGCGAATGGGATGGCTCGACGCGACCGAGTTGGACGCGCTCGCGCCCGTCGGCTAC
GACGACGAACGCGCGCTATGGGACGAATACGGCGCGTCGCGGGAGCGGCGCGCGGGGCTCGAGCTGCTCGGCGTTGACCG
TTATGGCGCGGACTGGCGTTTGAACGGGCTCAAGCGCCGCACGCCGTTCGACGCGCCGAAAATGGATGTCGAATCGCTGC
TCGCGGCGCTGCGCGAGGCCGCCGCCGTTTCGCTCATGTAA

Upstream 100 bases:

>100_bases
TGCACCGTCGCATGCCGCATGCCCGGGGGCGGCGCAACGCGCCGCGCACAGCCGCGGCGACGCGGCCGACGTCTCGCTTC
CGCAAGCAAGGATTTCGCAC

Downstream 100 bases:

>100_bases
AGCGATAGTGCCGATTATGAGCGATTCCGCACATTGTGAGCGTATTAAACGAGATAAGAAGGCGGTCATGCTTTCAATCA
ACGGAACCTTTCGTTTCATG

Product: pyridoxamine 5'-phosphate oxidase family protein

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine Oxidase Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNLAADPRAGFLVVDGLGDAAGA
SDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYLALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGY
DDERALWDEYGASRERRAGLELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM

Sequences:

>Translated_226_residues
MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNLAADPRAGFLVVDGLGDAAGA
SDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYLALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGY
DDERALWDEYGASRERRAGLELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM
>Mature_226_residues
MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNLAADPRAGFLVVDGLGDAAGA
SDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYLALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGY
DDERALWDEYGASRERRAGLELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24751; Mature: 24751

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHC
AADPRAGFLVVDGLGDAAGASDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYL
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCEEE
ALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGYDDERALWDEYGASRERRAGL
EEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCC
ELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM
EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNISAALPLHLLHRNVLGTLATHSRAPEGYPYPTVVPYAVDARHRPIVLVSGLAEHTRNL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCHHHHHHHC
AADPRAGFLVVDGLGDAAGASDSVLEAERATLVGRFEPAGADPHVVARYLRYHPDGERYL
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCEEE
ALGDFTFWALACERLRYIGGFGRMGWLDATELDALAPVGYDDERALWDEYGASRERRAGL
EEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCC
ELLGVDRYGADWRLNGLKRRTPFDAPKMDVESLLAALREAAAVSLM
EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA