| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yddG [C]
Identifier: 126455027
GI number: 126455027
Start: 1161997
End: 1163067
Strand: Direct
Name: yddG [C]
Synonym: BURPS1106A_1182
Alternate gene names: 126455027
Gene position: 1161997-1163067 (Clockwise)
Preceding gene: 126452108
Following gene: 126451522
Centisome position: 29.13
GC content: 74.04
Gene sequence:
>1071_bases ATGCCGTTCATCGCCGATTCCTCTCGCGCCGCGTTGCGCGGCGTGCTGTACGTTGCGTTGTCGGCTGTCGCGTTCGGCGC GATGGCGATCTTCGGCCGCTACGCGTACGCGGGCGGCGCCGACGTGCTCGGCCTCCTGATCGTTCGCTTTTCGATCGCGG GGGCGCTGCTCGTCGCCGTCGCGCGCCGCCGCCGCGTGCGCTGGCCGCGCGGCCGCGCGCTCGCCGCGATCGTCGGCATG GGCGCGCTCGGCTATGTCGGCCAGTCGCTGTGCTATTTCAGCGCACTGCAACACGCGCAGGCGAGTCTCGTCGCGCTGCT GCTCTATCTGTACCCGGCGTTCGTCGCGCTGCTTGCCGCCTGGTGGCTCGGCGAGCGGCTCACGCGCGCGAAGGCCGTTG CGCTCGCGCTGTGCGTCGCCGGTTCGGCGCTGATGGTGGGCGGCGGCCGCGGCGAGCCGCTCGGCATCGCGCTCGCGCTC GGCGCGGCCGTCGTCTACTCACTGTATATCGTCGTCGGCGCGAAGGCGGCGCGCGGCGTCGATCCGCTCGCGACCGTCGC GGTCATTTGTTGCGCCGCGGCCGCGATGCTCGCCATGCTCGCGCTCGCGCGGGCAGCGGCGTTCGACGCGCCGCCGCATT GGCCGCGCGCGGCGGCCGGCTGGGCGGCGCTCGTCGCGATCGCGCTCGTGTCGACCGTCGCCGCGATGCTCGCGTTCTTC GCCGGTCTCGCGCGGCTTGGCGCGGCCCGCACGTCGATGCTCTCGACGCTCGAGCCCGTCGTGACAGTCGCGCTTGCCGC CGCGCTGTTCGGCGAGACGCTGACGCCGCTGCAATGGGCGGGCGGCGTCGCGATCCTGGCGGCGGTATTGTGGCTCGTGC GCGCGGGCGACGCAGCCGATTCGCGCGGAGCCGGCGACGATCGCGAGCGTCGCCGGCTCGGGCGGCGAGATGACGAGCCG AGTGCGCCGGGCGGGAGCGGGGCCGACGGCGGGCCGGCCGGCTTCGTCGATCCGAACGAATGCGGAATTCGGCGCGTACG GAGCGCGGACGAGAACGCGCGACCGATGTGA
Upstream 100 bases:
>100_bases GCGGGGCGCCGCGCGGGCCGCAACGGGTTCGGCATAAATACCGCTTATGCGGCCATTCGAAGCTCGTTAGAATCGAGCGC TTTCACTACTCGCGCGAGCC
Downstream 100 bases:
>100_bases ACGAACGCGCGATGAGCGCGCAACGGTCGTGCGGCTTTGCAGCAAACGCCGCTGCGGCCCGGCGGCGAACGCTCGGGCGT GCCGGGCGGCCGCTACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPFIADSSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWPRGRALAAIVGM GALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALAL GAAVVYSLYIVVGAKAARGVDPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAGDAADSRGAGDDRERRRLGRRDDEP SAPGGSGADGGPAGFVDPNECGIRRVRSADENARPM
Sequences:
>Translated_356_residues MPFIADSSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWPRGRALAAIVGM GALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALAL GAAVVYSLYIVVGAKAARGVDPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAGDAADSRGAGDDRERRRLGRRDDEP SAPGGSGADGGPAGFVDPNECGIRRVRSADENARPM >Mature_355_residues PFIADSSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWPRGRALAAIVGMG ALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAAWWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALG AAVVYSLYIVVGAKAARGVDPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFFA GLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAGDAADSRGAGDDRERRRLGRRDDEPS APGGSGADGGPAGFVDPNECGIRRVRSADENARPM
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36437; Mature: 36306
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIADSSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ARRRRVRWPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAGDAAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCC SRGAGDDRERRRLGRRDDEPSAPGGSGADGGPAGFVDPNECGIRRVRSADENARPM CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure PFIADSSRAALRGVLYVALSAVAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ARRRRVRWPRGRALAAIVGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVALLAA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WWLGERLTRAKAVALALCVAGSALMVGGGRGEPLGIALALGAAVVYSLYIVVGAKAARGV HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DPLATVAVICCAAAAMLAMLALARAAAFDAPPHWPRAAAGWAALVAIALVSTVAAMLAFF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWAGGVAILAAVLWLVRAGDAAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCC SRGAGDDRERRRLGRRDDEPSAPGGSGADGGPAGFVDPNECGIRRVRSADENARPM CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA