| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126455020
Identifier: 126455020
GI number: 126455020
Start: 3531752
End: 3532888
Strand: Reverse
Name: 126455020
Synonym: BURPS1106A_3631
Alternate gene names: NA
Gene position: 3532888-3531752 (Counterclockwise)
Preceding gene: 126453052
Following gene: 126452223
Centisome position: 88.58
GC content: 72.3
Gene sequence:
>1137_bases GTGACTGCCTTTCCCGAATTTCATTGGACCGACGCCGACGGCGTCGAGCACGTCGCCCGCTGGCGCTCGGAAGCCGGCTC GCCGCCGCCGCGCCGCGCGGTCGTGGCCGACGATCGCACGACGGCCGACGTCGCGTATCGCCTCGCCTGCGAGGGCACGG CGCTCGTCTGGCAAGGCGATTTCCAGAACGCGCGCCAACTGCTGCAGGCGCTCGCGCGCCGCATCGAGCGCAAGCCGAAG AAGGCGAGGCCCGCCGCGACGCCCGTCGACGCGTTCAATCTCCACCGGATGGCGCAGGCGCAGCGCGCCCGCACGCTCGG CATGCTGCTGATACCGCTCGAGGCCGATTATTCGATCGCGCTGCGCCGCGCGCCGGATCTGCGCGCCGCGTGCGAAGAGG CGTACGGCGAGGGGGGCGAGCACTCGATCGCGTCGCTGCGCGAGTTGCTCGGCATCGTCGGCGCGCACGAATGGCGCAAG AAGGGCGTGCCGATCGCCGCGCTCGGCGGCGAGCGGATTCATCCGCACTACGGCGTGTTTTCGCCCGTGCGCGGCGAATA TGTGGCGCTCGTCGCGCGCGCGCCGCTGCCCTCGACGTCGCTCGCGTTCGAGATCGGCGTCGGCACCGGCGTGCTCGCCG CGGTGCTCGCGTCGCGCGGCGTCGGGCGGATCGTCGCGACCGATCAGGACAAGCGCGCGCTCGCTTGCGCGGCGGAGAAC GTCGCGCGGCTCGGTTATGCGCGGCAGATCGAGATCGTCGAAGCCGATCTGTTTCCCGACGGGCGTGCGCCGCTCATCGT CTGCAATCCGCCGTGGGTGCCCGCGCGGCCGAGCTCGCCGCTCGAATACGCGGTCTACGATCCGGACAGCCGGATGCTGA AGGGCTTTCTCGCCGGGCTCGCCGCGCATCTCGCGCCGGGCGGCGAAGGCTGGCTGATCCTGTCGGACTTCGCCGAGCAT CTCGGCCTGCGCACGCGCGGCGAATTGCTCGGCTGGATCGACGCGGCGGGTCTCGTCGTCGTCGGCCGCGACGACGTGAA GCCGGCGCATCCGAAGGCGTCGGACCCCACGGACCCGCTGCACCGCGCGCGCGCGGCCGAGATCACGTCGCTTTGGCGGC TTGCCGCCCGCGCGTGA
Upstream 100 bases:
>100_bases CATGCGCCGCCGCGCTTTTTTGCCGGCCGGGGCAAAGCGCGGTACTGTGTCGTCCGCGGCGCGTCGCGCCGCCCGCCGAC TCAACGATTCCCGATTCCTC
Downstream 100 bases:
>100_bases GCGCGGCGCGCTGCATGGGCGTGCGGCGGCGCGGATGATTTTCGGTAAACTGTGACGCTTATACGCACGCCTTGATGCCG CTGCGCCGCCCGAGCTTCGG
Product: putative methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Methylase Of Polypeptide Chain Release Factors; Methyltransferase Domain Protein; Adenine Specific DNA-Methyltransferase; Polypeptide Chain Release Factor Methylase; ElmF Protein; Methyltransferase SmallRibosomal; RNA Methyltransferase; Methylase Of Polypeptide Chain Release Factors Protein; Methyltransferase Small Domain-Containing Protein; 50S Ribosomal Methyltransferase PrmA Family Protein; Methylase
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGDFQNARQLLQALARRIERKPK KARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIALRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRK KGVPIAALGGERIHPHYGVFSPVRGEYVALVARAPLPSTSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGLAAHLAPGGEGWLILSDFAEH LGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPLHRARAAEITSLWRLAARA
Sequences:
>Translated_378_residues MTAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGDFQNARQLLQALARRIERKPK KARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIALRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRK KGVPIAALGGERIHPHYGVFSPVRGEYVALVARAPLPSTSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGLAAHLAPGGEGWLILSDFAEH LGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPLHRARAAEITSLWRLAARA >Mature_377_residues TAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGDFQNARQLLQALARRIERKPKK ARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIALRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRKK GVPIAALGGERIHPHYGVFSPVRGEYVALVARAPLPSTSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAENV ARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGLAAHLAPGGEGWLILSDFAEHL GLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPLHRARAAEITSLWRLAARA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40831; Mature: 40700
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGD CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHEEEEECCEEEEEECC FQNARQLLQALARRIERKPKKARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE LRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRKKGVPIAALGGERIHPHYGVF EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCCCCC SPVRGEYVALVARAPLPSTSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN CCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGL HHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH AAHLAPGGEGWLILSDFAEHLGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPL HHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHH HRARAAEITSLWRLAARA HHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAFPEFHWTDADGVEHVARWRSEAGSPPPRRAVVADDRTTADVAYRLACEGTALVWQGD CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHEEEEECCEEEEEECC FQNARQLLQALARRIERKPKKARPAATPVDAFNLHRMAQAQRARTLGMLLIPLEADYSIA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEE LRRAPDLRAACEEAYGEGGEHSIASLRELLGIVGAHEWRKKGVPIAALGGERIHPHYGVF EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCCCCCCCCC SPVRGEYVALVARAPLPSTSLAFEIGVGTGVLAAVLASRGVGRIVATDQDKRALACAAEN CCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH VARLGYARQIEIVEADLFPDGRAPLIVCNPPWVPARPSSPLEYAVYDPDSRMLKGFLAGL HHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH AAHLAPGGEGWLILSDFAEHLGLRTRGELLGWIDAAGLVVVGRDDVKPAHPKASDPTDPL HHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHH HRARAAEITSLWRLAARA HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA