| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454984
Identifier: 126454984
GI number: 126454984
Start: 352345
End: 352902
Strand: Direct
Name: 126454984
Synonym: BURPS1106A_0386
Alternate gene names: NA
Gene position: 352345-352902 (Clockwise)
Preceding gene: 126451646
Following gene: 126452776
Centisome position: 8.83
GC content: 57.53
Gene sequence:
>558_bases ATGGCTGAACTTGTTCTTGCTTCCAGCTCACAGGAAATCAGGGTGCTGGTGGTTATCGACACGGCTTACATCAGGAGTCT CAACATTACCCCAAGCAAGGATCCGCTTCAGCCGACGGGCATCGGCCACGATCATCAGTATCTGCTCTGCACCGGCTCGC GAGGCATCATCAGTGGGCAGGGAACGGGCGATCTGGAATTCAGGGCCAACGTCGGGGACTACGTGGCGTTTACCGGAACG TCGATTCAGGATAATTCGGACGACGCCGTGATCGTGTACGACATCAAGCATTACAGTGGCGACAAGGTTTTCAATCCGTT CAGCGCGAATATCATTACGCGCAAGGGTGCGGTGGAGCCGAACCCTGACACGCCCAGCCGGAACGGCTTGCCGCCGCGTC ATACGCCGATCAATTTCGCGACGTTCGATTCGAAGGTCGCGCGAAGCGGCCGGGAAGGCTTCGGCATCGCGTTTGGCCTC TACACGCTCCAGTCCAACGGGCAGGACCAAGATCTGTACGGTTACTACTGGTGGGATCCGTACATCACGGTCGCGTAA
Upstream 100 bases:
>100_bases GGTGTGGGATCCTCCAAAAGAGAGGAGAGTGGCCCGTGACACGTAGACCACGTGTTGTTTATCCGTTTCCAAAAAACATA CTGAAAATGGAGCGTTCACC
Downstream 100 bases:
>100_bases GGAGGCGGCTCGGCGACTGTGCTCGGGCTTGCCGGACGGCGCGATTCGGCTAGCTCGGCACCGGCGATGCCGGGCGGGCA TTGCCCGCCGAGGGGGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAELVLASSSQEIRVLVVIDTAYIRSLNITPSKDPLQPTGIGHDHQYLLCTGSRGIISGQGTGDLEFRANVGDYVAFTGT SIQDNSDDAVIVYDIKHYSGDKVFNPFSANIITRKGAVEPNPDTPSRNGLPPRHTPINFATFDSKVARSGREGFGIAFGL YTLQSNGQDQDLYGYYWWDPYITVA
Sequences:
>Translated_185_residues MAELVLASSSQEIRVLVVIDTAYIRSLNITPSKDPLQPTGIGHDHQYLLCTGSRGIISGQGTGDLEFRANVGDYVAFTGT SIQDNSDDAVIVYDIKHYSGDKVFNPFSANIITRKGAVEPNPDTPSRNGLPPRHTPINFATFDSKVARSGREGFGIAFGL YTLQSNGQDQDLYGYYWWDPYITVA >Mature_184_residues AELVLASSSQEIRVLVVIDTAYIRSLNITPSKDPLQPTGIGHDHQYLLCTGSRGIISGQGTGDLEFRANVGDYVAFTGTS IQDNSDDAVIVYDIKHYSGDKVFNPFSANIITRKGAVEPNPDTPSRNGLPPRHTPINFATFDSKVARSGREGFGIAFGLY TLQSNGQDQDLYGYYWWDPYITVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20267; Mature: 20136
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELVLASSSQEIRVLVVIDTAYIRSLNITPSKDPLQPTGIGHDHQYLLCTGSRGIISGQ CCEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEECC GTGDLEFRANVGDYVAFTGTSIQDNSDDAVIVYDIKHYSGDKVFNPFSANIITRKGAVEP CCCCEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEEECCCCCC NPDTPSRNGLPPRHTPINFATFDSKVARSGREGFGIAFGLYTLQSNGQDQDLYGYYWWDP CCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEEEEECE YITVA EEEEC >Mature Secondary Structure AELVLASSSQEIRVLVVIDTAYIRSLNITPSKDPLQPTGIGHDHQYLLCTGSRGIISGQ CEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEECC GTGDLEFRANVGDYVAFTGTSIQDNSDDAVIVYDIKHYSGDKVFNPFSANIITRKGAVEP CCCCEEEEECCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEEECCCCCC NPDTPSRNGLPPRHTPINFATFDSKVARSGREGFGIAFGLYTLQSNGQDQDLYGYYWWDP CCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEEEEECE YITVA EEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA