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The map label for this gene is yjnA [H]

Identifier: 126454973

GI number: 126454973

Start: 3095637

End: 3096425

Strand: Direct

Name: yjnA [H]

Synonym: BURPS1106A_3180

Alternate gene names: 126454973

Gene position: 3095637-3096425 (Clockwise)

Preceding gene: 126453986

Following gene: 126453696

Centisome position: 77.61

GC content: 70.34

Gene sequence:

>789_bases
TTGCCCCATATCGATCCGCTGTATTCCCTGTCCGGCCTCTTCGTCGGTTTTCTCGTCGGCTTGACGGGCGTCGGCGGCGG
TTCGCTGATGACGCCGATCCTCGTGCTGCTGTTCAACGTCCATCCGGCGACGGCGGTGGGCACCGATCTGCTTTACGCGG
CGCTCACCAAAGCGACGGGCACCTTCGTGCACGGGCTCAAGGGCACGGTCGAATGGCGGATCACCGGGCGTCTCGCGGCG
GGCAGCGTGCCCGCCGCCGCGATCACGCTGTGGTTCCTGCATGCGCACGGCATGCATTCGCAGGAAACGAGCCGGATGAT
CCAGTTCGTGCTCGGCGCCGCATTGCTGCTCACGTCGCTGTCGCTGCTGTTGCGCCCGCAGCTCGCCGCGTTCGCCGCGA
AGCGCACGCGCGCGCTGCCGCCCAACCCGACGCGCACGCTCGCCGCGACCGTGCTCACGGGCGCCGTGCTCGGCGTGCTC
GTGTCGCTGACCTCGGTCGGCGCGGGCGCGATCGGCGTGACGGTCCTGCTGCTGCTGTACCCGGCGCTGTCGACGACGCG
CATCGTCGGCTCCGACATCGCGCACGCGGTCCCGCTCACGCTCGTCGCGGGCGTCGGACACTGGATGCTCGGCTCGGTCG
ACTGGGCGATGCTGGTGTCGCTGCTGATCGGATCGGTGCCCGGAATCGTCGTCGGCAGCCATCTGTCGGCGCGCGCGCCC
GAAGGGCTGCTGCGCCGGGTGCTCGCGGCGACGCTCGTCGCGGTCGGCGTGAAGCTCGTGCTGTCCTGA

Upstream 100 bases:

>100_bases
GCTTTTTACGCTTTCCCGCATCGACCCGCGAGTTTTGCGACAATGTCGGACTTACTTCGCGCCGTCGCTTTCAAACGCCT
AACGTTCTCCGCCGATGTCG

Downstream 100 bases:

>100_bases
CGCCCGCCGGCGCGCCCGCCGCGCGTTCGCCGGCACACGGGCGCGCTTTGCCGCCCGTCGCGTGCATCACCGGCGCCGCC
GCCCAACCCGTCCCGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAALTKATGTFVHGLKGTVEWRITGRLAA
GSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTSLSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVL
VSLTSVGAGAIGVTVLLLLYPALSTTRIVGSDIAHAVPLTLVAGVGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAP
EGLLRRVLAATLVAVGVKLVLS

Sequences:

>Translated_262_residues
MPHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAALTKATGTFVHGLKGTVEWRITGRLAA
GSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTSLSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVL
VSLTSVGAGAIGVTVLLLLYPALSTTRIVGSDIAHAVPLTLVAGVGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAP
EGLLRRVLAATLVAVGVKLVLS
>Mature_261_residues
PHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAALTKATGTFVHGLKGTVEWRITGRLAAG
SVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTSLSLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLV
SLTSVGAGAIGVTVLLLLYPALSTTRIVGSDIAHAVPLTLVAGVGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAPE
GLLRRVLAATLVAVGVKLVLS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26901; Mature: 26769

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAALTKATG
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTSL
HHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLLLY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
PALSTTRIVGSDIAHAVPLTLVAGVGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCH
EGLLRRVLAATLVAVGVKLVLS
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PHIDPLYSLSGLFVGFLVGLTGVGGGSLMTPILVLLFNVHPATAVGTDLLYAALTKATG
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TFVHGLKGTVEWRITGRLAAGSVPAAAITLWFLHAHGMHSQETSRMIQFVLGAALLLTSL
HHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SLLLRPQLAAFAAKRTRALPPNPTRTLAATVLTGAVLGVLVSLTSVGAGAIGVTVLLLLY
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
PALSTTRIVGSDIAHAVPLTLVAGVGHWMLGSVDWAMLVSLLIGSVPGIVVGSHLSARAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCCH
EGLLRRVLAATLVAVGVKLVLS
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]