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The map label for this gene is ydhJ [H]

Identifier: 126454942

GI number: 126454942

Start: 1657396

End: 1658277

Strand: Reverse

Name: ydhJ [H]

Synonym: BURPS1106A_1697

Alternate gene names: 126454942

Gene position: 1658277-1657396 (Counterclockwise)

Preceding gene: 126454915

Following gene: 126452593

Centisome position: 41.58

GC content: 68.03

Gene sequence:

>882_bases
ATGTTCTTGCGAAAACTTTTCGGCTTCGTCGCGACAGCCGTCATCCTGATCGTCGCGATCCTGATCGGGCGCACGCTGTG
GGTCCACTACATGGACGAGCCGTGGACCCGCGACGGCCGCGTGCGCGCGGAGATCGTCAACGTCGCGCCGGACGTGTCGG
GCGCGGTCGTCGAGTTGCCGGTGCGCGACAACCAGTTCGTGAAGCAAGGCGACCTCGTGATGCAGATCGATCCGTCGCAT
TTCCGGATCGCGGTCGAGCAGGCGCAGGCGGCCGTCGCCGCCCGCCGCGCGGAGCTGCAGATGCGCCGCGCCGACGCCGC
GCGCCGCGCGGATCTCGACGCGCTCGTCGTGTCGAAGGAAAGCCGCGAGAATTCGGCGCAGACCGCGTCGAGCGCCGAGG
CGCAGTATCAGCAGGCGCTCGCCGCGCTCGACGCCGCGAAGCTCAACCTCGAGCGCACGCGCGTGGTCGCGCCCGTCGAC
GGCTACGTGACGAACCTGCAAGTCTTCAAGGGCGACTACGCGAGCGCCGGCCAGGCGAAGCTCGCGATCGTCGACAGCCA
CTCGTTCTGGGTCTACGGCTATTTCGAGGAAACGAAGCTGCCGCGCGTGAAGATCGGCGCGAAGGCCGAGATGCGGCTGA
TGAGCGGCGGCGTGCTGAAGGGCCACGTCGAGAGCATCTCGCGCGGCATCTACGACCGCGACAATCCGCAAAGCCGCGAC
CTCGTCGCCGACGTGAACCCCACGTTCAACTGGGTGCGGCTCGCGCAGCGCGTGCCGGTGCGCATCCATATCGACGAGGT
GCCGAAGGATCTCGTGCTGTCGGCCGGCACGACCTGCACGGTGATCGTCGAGCCGGACGGCGGCGGCAAGCGCAAGTCGT
AA

Upstream 100 bases:

>100_bases
TATCGCGTCGTCTGGCACCCGTCGCTGTTCCGGGCCAGCCTTCTCGTGTGCATTTGCGGCGGGCTGAGCCTCGCCGTCTA
CCGTTGATATGAATCGAACC

Downstream 100 bases:

>100_bases
GGCGTAGCGCGTAGCACGTCGCGCGACGCGCGCGGCGGTTCGCGACGCGGCTGCGGCCTCGCGCGCGCGACACAAGGAAC
GGCCGGCATGCTCGGGCATG

Product: putative fusaric acid resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MFLRKLFGFVATAVILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVELPVRDNQFVKQGDLVMQIDPSH
FRIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESRENSAQTASSAEAQYQQALAALDAAKLNLERTRVVAPVD
GYVTNLQVFKGDYASAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDGGGKRKS

Sequences:

>Translated_293_residues
MFLRKLFGFVATAVILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVELPVRDNQFVKQGDLVMQIDPSH
FRIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESRENSAQTASSAEAQYQQALAALDAAKLNLERTRVVAPVD
GYVTNLQVFKGDYASAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDGGGKRKS
>Mature_293_residues
MFLRKLFGFVATAVILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVELPVRDNQFVKQGDLVMQIDPSH
FRIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKESRENSAQTASSAEAQYQQALAALDAAKLNLERTRVVAPVD
GYVTNLQVFKGDYASAGQAKLAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRD
LVADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDGGGKRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=280, Percent_Identity=45, Blast_Score=247, Evalue=5e-67,
Organism=Escherichia coli, GI1789637, Length=283, Percent_Identity=40.2826855123675, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1790519, Length=307, Percent_Identity=30.6188925081433, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788711, Length=335, Percent_Identity=27.7611940298507, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1789041, Length=301, Percent_Identity=25.9136212624585, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87082036, Length=136, Percent_Identity=36.0294117647059, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790012, Length=274, Percent_Identity=23.3576642335766, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32308; Mature: 32308

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLRKLFGFVATAVILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVELP
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VRDNQFVKQGDLVMQIDPSHFRIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKE
CCCCCEEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
SRENSAQTASSAEAQYQQALAALDAAKLNLERTRVVAPVDGYVTNLQVFKGDYASAGQAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEE
LAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRD
EEEEECCCEEEEEEECCCCCCEEEECCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCCC
LVADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDGGGKRKS
EEEECCCCHHHHHHHHHCCEEEECCCCCHHHEEECCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MFLRKLFGFVATAVILIVAILIGRTLWVHYMDEPWTRDGRVRAEIVNVAPDVSGAVVELP
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VRDNQFVKQGDLVMQIDPSHFRIAVEQAQAAVAARRAELQMRRADAARRADLDALVVSKE
CCCCCEEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
SRENSAQTASSAEAQYQQALAALDAAKLNLERTRVVAPVDGYVTNLQVFKGDYASAGQAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEE
LAIVDSHSFWVYGYFEETKLPRVKIGAKAEMRLMSGGVLKGHVESISRGIYDRDNPQSRD
EEEEECCCEEEEEEECCCCCCEEEECCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCCC
LVADVNPTFNWVRLAQRVPVRIHIDEVPKDLVLSAGTTCTVIVEPDGGGKRKS
EEEECCCCHHHHHHHHHCCEEEECCCCCHHHEEECCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]