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The map label for this gene is 126454926

Identifier: 126454926

GI number: 126454926

Start: 487861

End: 488571

Strand: Direct

Name: 126454926

Synonym: BURPS1106A_0525

Alternate gene names: NA

Gene position: 487861-488571 (Clockwise)

Preceding gene: 126452907

Following gene: 126453811

Centisome position: 12.23

GC content: 76.09

Gene sequence:

>711_bases
ATGTCCGCTTCCTCCCTTTCCCTCGAATCGCTGCATCCGTCGCTCTGGCGCGGCTCGCAGCTCGCGCGCGGCGGCCCGCG
CACGGTCGATACCGGCTATGCGGCGCTGTCGGTCGAGTTGCCGGGGGGCGGCTGGCCGCTCGGCGGGCTCGTCGAGCTGC
TCGTGCCGCACATGGGCTGCGGCGAGATGCGCGTGCTCGCGCCCGCGCTCGCGGCGACAGGCAGCGCGCGGCGGCCGCTC
GCGTTCGTCGCGCCGCCGCAGCCGCCGCACGCGTGCGCGCTCGCCGGTCTCGGCGTGCCGCTCGACGCGCTGCTGTGGCT
GCGCGCGAGCAGCGGCGTCAACGCGCTGTGGGCAGCCGAGCAGGCGCTCAGGACGGGCTGCTGCGGCGCGCTTCTGCTAT
GGCACCAGAACGCGCGCGCCGATGCGCTGCGCCGCCTGCATCTTGCCGCCGCCCGCGCGGGCGACACGCTGTTCGTGATG
TTCCGGCCGCTCGCCGCCGCGCAGCAGCCGTCGCCCGCGGTGCTGCGCCTCGCGCTGCATCCGTCGCCGGGCGGCGTGTC
GGTCGAGATCGTCAAGCGCCGCGGGCCGGCGCGCGGCGAGCCGCTTGCGCTCGAATTGCCGTCGCCCATCGTGGAGAGCC
GCTATGCGCGCCTTGCTCGGCATCCATCTGCCGCGCCTGCCGCTCGACGTGTGCGCGCCGCCGTCGCCTGA

Upstream 100 bases:

>100_bases
TCCCGCCGGTCCTCTGCCGAAAGGCCGGTTTTGCATCGGCCGCTGTGCGTGGCGAACGGGTTGCCATATACTGTATAAAC
GTACAGTAATCGGCAATGCG

Downstream 100 bases:

>100_bases
CGGCGGCAACGGCTGCGCGGTGCTCGAGCAGGGCGTCGTGCTGATCGCCGATGCGCCCGCGCGCGCGAACGGCGTGCGTG
CCGGCATGAAGCGCGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSASSLSLESLHPSLWRGSQLARGGPRTVDTGYAALSVELPGGGWPLGGLVELLVPHMGCGEMRVLAPALAATGSARRPL
AFVAPPQPPHACALAGLGVPLDALLWLRASSGVNALWAAEQALRTGCCGALLLWHQNARADALRRLHLAAARAGDTLFVM
FRPLAAAQQPSPAVLRLALHPSPGGVSVEIVKRRGPARGEPLALELPSPIVESRYARLARHPSAAPAARRVRAAVA

Sequences:

>Translated_236_residues
MSASSLSLESLHPSLWRGSQLARGGPRTVDTGYAALSVELPGGGWPLGGLVELLVPHMGCGEMRVLAPALAATGSARRPL
AFVAPPQPPHACALAGLGVPLDALLWLRASSGVNALWAAEQALRTGCCGALLLWHQNARADALRRLHLAAARAGDTLFVM
FRPLAAAQQPSPAVLRLALHPSPGGVSVEIVKRRGPARGEPLALELPSPIVESRYARLARHPSAAPAARRVRAAVA
>Mature_235_residues
SASSLSLESLHPSLWRGSQLARGGPRTVDTGYAALSVELPGGGWPLGGLVELLVPHMGCGEMRVLAPALAATGSARRPLA
FVAPPQPPHACALAGLGVPLDALLWLRASSGVNALWAAEQALRTGCCGALLLWHQNARADALRRLHLAAARAGDTLFVMF
RPLAAAQQPSPAVLRLALHPSPGGVSVEIVKRRGPARGEPLALELPSPIVESRYARLARHPSAAPAARRVRAAVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24556; Mature: 24425

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSLSLESLHPSLWRGSQLARGGPRTVDTGYAALSVELPGGGWPLGGLVELLVPHMGC
CCCCCCCHHHHCHHHHCCCHHCCCCCCEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCC
GEMRVLAPALAATGSARRPLAFVAPPQPPHACALAGLGVPLDALLWLRASSGVNALWAAE
CCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHH
QALRTGCCGALLLWHQNARADALRRLHLAAARAGDTLFVMFRPLAAAQQPSPAVLRLALH
HHHHHCCHHEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCEEEEEEEC
PSPGGVSVEIVKRRGPARGEPLALELPSPIVESRYARLARHPSAAPAARRVRAAVA
CCCCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SASSLSLESLHPSLWRGSQLARGGPRTVDTGYAALSVELPGGGWPLGGLVELLVPHMGC
CCCCCCHHHHCHHHHCCCHHCCCCCCEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCC
GEMRVLAPALAATGSARRPLAFVAPPQPPHACALAGLGVPLDALLWLRASSGVNALWAAE
CCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHH
QALRTGCCGALLLWHQNARADALRRLHLAAARAGDTLFVMFRPLAAAQQPSPAVLRLALH
HHHHHCCHHEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCEEEEEEEC
PSPGGVSVEIVKRRGPARGEPLALELPSPIVESRYARLARHPSAAPAARRVRAAVA
CCCCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA