Click here to switch to the map view.

The map label for this gene is yceJ [C]

Identifier: 126454920

GI number: 126454920

Start: 80057

End: 80584

Strand: Direct

Name: yceJ [C]

Synonym: BURPS1106A_0086

Alternate gene names: 126454920

Gene position: 80057-80584 (Clockwise)

Preceding gene: 126453938

Following gene: 126454298

Centisome position: 2.01

GC content: 64.77

Gene sequence:

>528_bases
ATGATGAAGACGACGTTCAGCCCGCTCGCGCGGCTGCTGCATTGGGTGATGGCGGCGATGATCGTGTCGATGCTGTTCGT
CGGCGCGGGGATGGTGACGACGGTGTCGGGGCGGCATGCGGCGCTGGTGGCGATGCATAAGCCGCTTGGGGTGGCGGTGC
TGGTGCTGGCTTGCGTGCGGGTGGTGGTGCGATTGAGTTCGCGGCCGCCTGCATTGCCTGCGGATTTGCCGGGGTGGCAG
AAATTCGCGGCGCACGGGTCGCATCTCGTGCTGTATGCGCTGATGATCGCGATGCCGTTGGTCGGGTGGGCGATGCTGTC
GGCGGGCGGGTATCCGGTGACGTTGGGCGGCGGTGTGCGATTGCCGTCGATTGTGCCTGCCGATGCGGTTTGGTTTGCTT
GGCTGCGGCATGCGCATCGGTGGCTGGCTTATCTGTTCTTTGCGACGTTTCTCGCGCACTTCGCCGCCGCGCTTTATCAC
GGGATGATTCGGCGGGATGGGGTGTTGAGGGCGATGGTGGGGAGGTAA

Upstream 100 bases:

>100_bases
TGCTCGCCGCGCGCTCGGCCGCGTATGCGGATTCGTATCTGCGGCGCACGAGCGAAGAAGCCGGAATGCCCGGCGCGGCG
CATCCGCTTTCGGAGAAACG

Downstream 100 bases:

>100_bases
GCGCGATGGGGCGCGGCGATCGCGGTTGGGAGCGACGGCGCGAACTTCGTTCTTGGTAACGTTCGAAGAAGGGACCGCGG
GCCGCAATGATGCGGCCCGC

Product: putative [Ni] hydrogenase, b-type cytochrome subunit

Products: NA

Alternate protein names: Cytochrome; Type-B Cytochrome; Cytochrome B-Like Protein; Nickel-Dependent Hydrogenase

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMKTTFSPLARLLHWVMAAMIVSMLFVGAGMVTTVSGRHAALVAMHKPLGVAVLVLACVRVVVRLSSRPPALPADLPGWQ
KFAAHGSHLVLYALMIAMPLVGWAMLSAGGYPVTLGGGVRLPSIVPADAVWFAWLRHAHRWLAYLFFATFLAHFAAALYH
GMIRRDGVLRAMVGR

Sequences:

>Translated_175_residues
MMKTTFSPLARLLHWVMAAMIVSMLFVGAGMVTTVSGRHAALVAMHKPLGVAVLVLACVRVVVRLSSRPPALPADLPGWQ
KFAAHGSHLVLYALMIAMPLVGWAMLSAGGYPVTLGGGVRLPSIVPADAVWFAWLRHAHRWLAYLFFATFLAHFAAALYH
GMIRRDGVLRAMVGR
>Mature_175_residues
MMKTTFSPLARLLHWVMAAMIVSMLFVGAGMVTTVSGRHAALVAMHKPLGVAVLVLACVRVVVRLSSRPPALPADLPGWQ
KFAAHGSHLVLYALMIAMPLVGWAMLSAGGYPVTLGGGVRLPSIVPADAVWFAWLRHAHRWLAYLFFATFLAHFAAALYH
GMIRRDGVLRAMVGR

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787296, Length=166, Percent_Identity=28.9156626506024, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18980; Mature: 18980

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTTFSPLARLLHWVMAAMIVSMLFVGAGMVTTVSGRHAALVAMHKPLGVAVLVLACVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCHHHHHHHHCCHHHHHHHHHHHH
VVVRLSSRPPALPADLPGWQKFAAHGSHLVLYALMIAMPLVGWAMLSAGGYPVTLGGGVR
HHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
LPSIVPADAVWFAWLRHAHRWLAYLFFATFLAHFAAALYHGMIRRDGVLRAMVGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure
MMKTTFSPLARLLHWVMAAMIVSMLFVGAGMVTTVSGRHAALVAMHKPLGVAVLVLACVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCHHHHHHHHCCHHHHHHHHHHHH
VVVRLSSRPPALPADLPGWQKFAAHGSHLVLYALMIAMPLVGWAMLSAGGYPVTLGGGVR
HHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
LPSIVPADAVWFAWLRHAHRWLAYLFFATFLAHFAAALYHGMIRRDGVLRAMVGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA