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The map label for this gene is ybcL [H]

Identifier: 126454897

GI number: 126454897

Start: 3754391

End: 3754966

Strand: Direct

Name: ybcL [H]

Synonym: BURPS1106A_3852

Alternate gene names: 126454897

Gene position: 3754391-3754966 (Clockwise)

Preceding gene: 126453832

Following gene: 126451885

Centisome position: 94.13

GC content: 71.88

Gene sequence:

>576_bases
GTGCCGAGAGGTTCGTCCCGTCGTCTGCTCTCGCTCGCCCTCGTCTGCGCTTGCGCGCTCGCGCCGGTCGGCGGCTCACG
CGCGCTCGCCGAAGACGCGTTCATGCTGACGAGCGACGATCTGCACCCCGGCGGCCGAGTCGGCGCGCCGCACGTGTTCA
ACCAGGGCGACTGCAAGGGCGGCAACCGCTCGCCGCAGCTCGCGTGGCGCAACCCGCCGCCCGGCACGAAAGGCTTCGCC
ATCACGATGTTCGACCCCGACGCACCCGGCCGCGGCTGGTGGCACTGGGCCGTCGTCGGCATTCCGGCGAGCGTATCGAG
CGTGCCCGCCGACGCGAGCGCATCCGGCTTCCTGCGCAAGCTCGGCGCAGCCGAGGCGCGCAATGATTTCGGCACCGACG
GCTACGGCGGCCCATGCCCGCCGCCCGGCAAGCCGCACCGCTACGTGATCACCGTCCACGCGCTGAAGGCAACCGACCTG
CGCGTCGCGACGGGCCGCCCCGCGCAGATGTTCGACCACGAGATCGGCACCGAATCGATCGGCTCCGCCCAACTCGTCGT
CACATACGGCCGCTAG

Upstream 100 bases:

>100_bases
TCATATTCGGGTTCGAGCAGCACACCCGACCGCGAGCAGCGCCGGATCGCCCCGGCACAATTGACGGGAGAAGGGCCATA
TGCGTGTGGGTCGCCGAGCC

Downstream 100 bases:

>100_bases
GGTCTGGCTATACATACGGAACGCGCATGCGAAGGCCCGAAATCGCCCGCGCGGCGGCGACGCCGCCCGTCGCTCGTTCG
GCTCGGCCGAACGGCGCGCC

Product: putative phosphatidylethanolamine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPRGSSRRLLSLALVCACALAPVGGSRALAEDAFMLTSDDLHPGGRVGAPHVFNQGDCKGGNRSPQLAWRNPPPGTKGFA
ITMFDPDAPGRGWWHWAVVGIPASVSSVPADASASGFLRKLGAAEARNDFGTDGYGGPCPPPGKPHRYVITVHALKATDL
RVATGRPAQMFDHEIGTESIGSAQLVVTYGR

Sequences:

>Translated_191_residues
MPRGSSRRLLSLALVCACALAPVGGSRALAEDAFMLTSDDLHPGGRVGAPHVFNQGDCKGGNRSPQLAWRNPPPGTKGFA
ITMFDPDAPGRGWWHWAVVGIPASVSSVPADASASGFLRKLGAAEARNDFGTDGYGGPCPPPGKPHRYVITVHALKATDL
RVATGRPAQMFDHEIGTESIGSAQLVVTYGR
>Mature_190_residues
PRGSSRRLLSLALVCACALAPVGGSRALAEDAFMLTSDDLHPGGRVGAPHVFNQGDCKGGNRSPQLAWRNPPPGTKGFAI
TMFDPDAPGRGWWHWAVVGIPASVSSVPADASASGFLRKLGAAEARNDFGTDGYGGPCPPPGKPHRYVITVHALKATDLR
VATGRPAQMFDHEIGTESIGSAQLVVTYGR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=179, Percent_Identity=41.8994413407821, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1786990, Length=155, Percent_Identity=40.6451612903226, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19983; Mature: 19852

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRGSSRRLLSLALVCACALAPVGGSRALAEDAFMLTSDDLHPGGRVGAPHVFNQGDCKG
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
GNRSPQLAWRNPPPGTKGFAITMFDPDAPGRGWWHWAVVGIPASVSSVPADASASGFLRK
CCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH
LGAAEARNDFGTDGYGGPCPPPGKPHRYVITVHALKATDLRVATGRPAQMFDHEIGTESI
HCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECEEEEECCCCHHHHHHHCCCCCC
GSAQLVVTYGR
CCEEEEEEECC
>Mature Secondary Structure 
PRGSSRRLLSLALVCACALAPVGGSRALAEDAFMLTSDDLHPGGRVGAPHVFNQGDCKG
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
GNRSPQLAWRNPPPGTKGFAITMFDPDAPGRGWWHWAVVGIPASVSSVPADASASGFLRK
CCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH
LGAAEARNDFGTDGYGGPCPPPGKPHRYVITVHALKATDLRVATGRPAQMFDHEIGTESI
HCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECEEEEECCCCHHHHHHHCCCCCC
GSAQLVVTYGR
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]