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The map label for this gene is flgC [H]

Identifier: 126454889

GI number: 126454889

Start: 261775

End: 262200

Strand: Direct

Name: flgC [H]

Synonym: BURPS1106A_0279

Alternate gene names: 126454889

Gene position: 261775-262200 (Clockwise)

Preceding gene: 126451866

Following gene: 126454100

Centisome position: 6.56

GC content: 65.02

Gene sequence:

>426_bases
ATGCCTTCGTTGATGAACATTTTCGACGTCGCGGGTTCCGCGATGTCGGCCCAGTCGCAGCGCCTGAACGTCACGGCGTC
GAACCTCGCGAACGCCGACAGCGTGACGGGCCCCGACGGCAAGCCCTACAAGGCGAAGCAGGTGGTGTTCGCGACCGCGC
CGATGGGCCGCGCGCGCACCGCGTCCGGCCAGGGTGTCGGCGGCGTGCAGGTGAGCAAGGTGATCGACGATCCGTCGCCG
ATGAAGACGGCTTACGACCCGTCGAACCCGGCCGCCGATCAGAACGGCTACGTGACGATGCCGAACGTCGATCCGGTGCA
GGAGATGGTCAACATGATTTCCGCGTCGCGCTCGTACCAGGCGAACGTCGAGACGCTCAATACCGCGAAGCAGCTGATGC
TCAAGACGCTGACGATCGGCAGCTGA

Upstream 100 bases:

>100_bases
CGAATTCGAGTTCGTGACGCGCCGCTTCGGCGCTTTTCCCGCGTGCCGCGCGCGTCACGGGAAACGGTTGAATGTGCGCG
CAACGCGATAAGGAGTACGC

Downstream 100 bases:

>100_bases
CGCCCCCCTTTTTCATCGATCGAAACACGCATAGCAGAGGAAGGCGAACCCGGATGACATCCTCCTTCACCACCATCGGC
GGCAGCGGCACGACCGTCAA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQGVGGVQVSKVIDDPSP
MKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGS

Sequences:

>Translated_141_residues
MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQGVGGVQVSKVIDDPSP
MKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGS
>Mature_140_residues
PSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQGVGGVQVSKVIDDPSPM
KTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLTIGS

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=65.9420289855072, Blast_Score=181, Evalue=1e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14754; Mature: 14623

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRART
CCCHHHHHHHHCCHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
ASGQGVGGVQVSKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQ
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKQLMLKTLTIGS
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PSLMNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRART
CCHHHHHHHHCCHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
ASGQGVGGVQVSKVIDDPSPMKTAYDPSNPAADQNGYVTMPNVDPVQEMVNMISASRSYQ
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCC
ANVETLNTAKQLMLKTLTIGS
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA