| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126454877
Identifier: 126454877
GI number: 126454877
Start: 2178904
End: 2179050
Strand: Direct
Name: 126454877
Synonym: BURPS1106A_2191
Alternate gene names: NA
Gene position: 2178904-2179050 (Clockwise)
Preceding gene: 126454892
Following gene: 126452316
Centisome position: 54.63
GC content: 68.03
Gene sequence:
>147_bases ATGCCGCCCTCCGCACCCGTCCGCATCTTTGTGGGCGAGGCGGTTAAATGGGTCATTCCGCGCGCGATGCGCGATCGATA CACTTTCGCGGCGAACGCGGCCCGGCCACGCAATGCAAAACGCGCGGGACGCGCGGCAGGCGCGTAG
Upstream 100 bases:
>100_bases TTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGTTTGGCGCAACGAGTATTATCGAT TCGAGCGATCATCGAATCGC
Downstream 100 bases:
>100_bases CGCGTCGACTTCCGAGGCGGCATGCGTCGCGCCTCCCTCGGCAGCGGTGCGTCGGGCGAACGCCGCCGCGCCCCATTCAC CGCTTGATCGACACCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MPPSAPVRIFVGEAVKWVIPRAMRDRYTFAANAARPRNAKRAGRAAGA
Sequences:
>Translated_48_residues MPPSAPVRIFVGEAVKWVIPRAMRDRYTFAANAARPRNAKRAGRAAGA >Mature_47_residues PPSAPVRIFVGEAVKWVIPRAMRDRYTFAANAARPRNAKRAGRAAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5223; Mature: 5092
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSAPVRIFVGEAVKWVIPRAMRDRYTFAANAARPRNAKRAGRAAGA CCCCCCEEEEECCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PPSAPVRIFVGEAVKWVIPRAMRDRYTFAANAARPRNAKRAGRAAGA CCCCCEEEEECCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA