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The map label for this gene is dnaA [C]

Identifier: 126454849

GI number: 126454849

Start: 3220168

End: 3220893

Strand: Direct

Name: dnaA [C]

Synonym: BURPS1106A_3302

Alternate gene names: 126454849

Gene position: 3220168-3220893 (Clockwise)

Preceding gene: 126453466

Following gene: 126452832

Centisome position: 80.74

GC content: 70.66

Gene sequence:

>726_bases
GTGACTGTAACCCGTCAACTGACGCTCGACCTCGGCACCCCGCCGCCCTCGACGTTCGACAACTTCTACTCGGGCACGAA
CGCCGAGCTCGTCACGCGCCTGCGCGAGCTCGATCTCGCGCTCGCGGCCGGGCCCGTGGCCGATCGCACGTTCTACGTGT
GGGGCGAGGCGGGCAGCGGCCGCAGCCATTTGCTGCAGGCGCTCGTGCACGATACGACTTACGGCCACGCGCGCTACGTG
AGCCCGCAAGGCGGGCTCGACGCGCTCGCGTTCGATCCGCGCGTGTCGCTGTACGCGGTCGACGATTGCGACGCGCTCAA
CGACGCGCAGCAGATCGCGCTCTTCAACCTGTTCAACGAAGTGCGCGCGCACCCCATGACGGCGCTCGTCGTGGCGGGCC
CCGCCGCGCCGCTCGCGCTCGACGTCCGCGAGGACCTGCGCACCCGCCTCGGCTGGGGGCTCGTGTTCCATCTCGCGCCG
CTCACCGACGAAGGCAAGGCGGCCGTGCTCAAGCACGCGGCGAAGGAGCGCGGCATCGCGCTCGCCGACGACGTGCCCTC
ATACCTCCTCACCCATTTCCGCCGCGACATGCCGAGCCTGATGTCGCTTCTCGACGCGCTCGACCGCTTCTCGCTCGAGC
AAAAGCGCGCGGTGACGCTGCCGCTGCTGCGCGCGATGCTGGCCGCGCCGGAACGCGAGGAGCCCGCGCCGGGCCGGTTC
AAGTAG

Upstream 100 bases:

>100_bases
CGCCCGCCCGCGTTGCGCCCGGCCGCGAAACCCGCCGCCCGCCGACGATGCCGCCGCGCCGCCGCCCTTCGGGCACGCAA
CACCGGACCTGATTCGCACC

Downstream 100 bases:

>100_bases
CTTCAAGTAAAATGCGCATCCATGACTAATCTGGCACTTTTCGATCTGGATCACACGCTGATCCCCACCGATAGCGATCA
CGAGTGGGGCCGCTTCATGG

Product: DnaA regulatory inactivator Hda

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTVTRQLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSGRSHLLQALVHDTTYGHARYV
SPQGGLDALAFDPRVSLYAVDDCDALNDAQQIALFNLFNEVRAHPMTALVVAGPAAPLALDVREDLRTRLGWGLVFHLAP
LTDEGKAAVLKHAAKERGIALADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAMLAAPEREEPAPGRF
K

Sequences:

>Translated_241_residues
MTVTRQLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSGRSHLLQALVHDTTYGHARYV
SPQGGLDALAFDPRVSLYAVDDCDALNDAQQIALFNLFNEVRAHPMTALVVAGPAAPLALDVREDLRTRLGWGLVFHLAP
LTDEGKAAVLKHAAKERGIALADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAMLAAPEREEPAPGRF
K
>Mature_240_residues
TVTRQLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSGRSHLLQALVHDTTYGHARYVS
PQGGLDALAFDPRVSLYAVDDCDALNDAQQIALFNLFNEVRAHPMTALVVAGPAAPLALDVREDLRTRLGWGLVFHLAPL
TDEGKAAVLKHAAKERGIALADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAMLAAPEREEPAPGRFK

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaA family. HdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI226510964, Length=239, Percent_Identity=33.4728033472803, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020591
- InterPro:   IPR017788
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 26370; Mature: 26239

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTRQLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSG
CCCEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
RSHLLQALVHDTTYGHARYVSPQGGLDALAFDPRVSLYAVDDCDALNDAQQIALFNLFNE
HHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHH
VRAHPMTALVVAGPAAPLALDVREDLRTRLGWGLVFHLAPLTDEGKAAVLKHAAKERGIA
HHCCCCEEEEEECCCCCEEEHHHHHHHHHHCHHEEEEECCCCCCCHHHHHHHHHHHCCCC
LADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAMLAAPEREEPAPGRF
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
K
C
>Mature Secondary Structure 
TVTRQLTLDLGTPPPSTFDNFYSGTNAELVTRLRELDLALAAGPVADRTFYVWGEAGSG
CCEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
RSHLLQALVHDTTYGHARYVSPQGGLDALAFDPRVSLYAVDDCDALNDAQQIALFNLFNE
HHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHH
VRAHPMTALVVAGPAAPLALDVREDLRTRLGWGLVFHLAPLTDEGKAAVLKHAAKERGIA
HHCCCCEEEEEECCCCCEEEHHHHHHHHHHCHHEEEEECCCCCCCHHHHHHHHHHHCCCC
LADDVPSYLLTHFRRDMPSLMSLLDALDRFSLEQKRAVTLPLLRAMLAAPEREEPAPGRF
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]