| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126454733
Identifier: 126454733
GI number: 126454733
Start: 2924742
End: 2925314
Strand: Direct
Name: 126454733
Synonym: BURPS1106A_2980
Alternate gene names: NA
Gene position: 2924742-2925314 (Clockwise)
Preceding gene: 126451958
Following gene: 126454018
Centisome position: 73.33
GC content: 68.06
Gene sequence:
>573_bases GTGACCGAAGCCTTCCTGATCTCGACGGGCGCCGTCGCCCTCGCCGAAATCGGCGACAAGACCCAACTGCTTTCCCTCGT CCTCGCCGCACGTTACCGCAAGCCGCTGCCGATCATCGCCGGCGTCCTCGCCGCGACCCTGATCAATCATGGTTTCGCCG GCGCGCTCGGCGAGTGGCTCGGCATCTATCTGACGCCGGCGGTGATGCGCTGGGCGCTCGCGCTCTCGTTCATCGGGATG GGCCTGTGGATTCTCGTGCCGGACAAGCTCGACGCCGACGAGGCGAACGCGAACCGCTCGCGGCTCGGCGTGTTCGGCGC GACGTTCGTCGCGTTCTTCCTCGCGGAAATGGGCGACAAGACGCAGATCGCGACCGTCGCGCTCGCCGCGCGGTTCCAGG ATTACGTGGGCGTCGTTGCCGGCACGACACTCGGCATGATGCTCGCGAACGTGCCCGCGATCCTGCTCGGCGACCGCTTC GCGCATCGGCTGCCGACGAAGCTCGTTCACGGCATCGCGGCCGTGCTGTTCATCGTGCTCGGCGCGCTCGCGTTCCTGCA CGGCGGCGCATGA
Upstream 100 bases:
>100_bases CAGGGCCTGGCGAGACCGATGGTTCTCCGCACGCCGCAGAGGGGCCCGGCGCGCGGCGAATCGTCGCTCGCGTTCAACCT GGCCCTGGGATATCCGTTCC
Downstream 100 bases:
>100_bases CGGCGCGAAGGCCGCGGCCGGCCCGCGGCAAGACGCTCGCGCGCCGCCCATCGCGGCCGCCGGGCGACTGGCGAGCCGCT GCCGGACGGCGCTCGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWLGIYLTPAVMRWALALSFIGM GLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDKTQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRF AHRLPTKLVHGIAAVLFIVLGALAFLHGGA
Sequences:
>Translated_190_residues MTEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWLGIYLTPAVMRWALALSFIGM GLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDKTQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRF AHRLPTKLVHGIAAVLFIVLGALAFLHGGA >Mature_189_residues TEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWLGIYLTPAVMRWALALSFIGMG LWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDKTQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRFA HRLPTKLVHGIAAVLFIVLGALAFLHGGA
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19973; Mature: 19842
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWL CCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH GIYLTPAVMRWALALSFIGMGLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDK HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRFAHRLPTKLVHGIAAVLFIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALAFLHGGA HHHHHHHCCC >Mature Secondary Structure TEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWL CCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH GIYLTPAVMRWALALSFIGMGLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDK HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRFAHRLPTKLVHGIAAVLFIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALAFLHGGA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA