| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454702
Identifier: 126454702
GI number: 126454702
Start: 3527027
End: 3527602
Strand: Direct
Name: 126454702
Synonym: BURPS1106A_3627
Alternate gene names: NA
Gene position: 3527027-3527602 (Clockwise)
Preceding gene: 126455179
Following gene: 126453445
Centisome position: 88.43
GC content: 70.66
Gene sequence:
>576_bases GTGAATCGAAACGGAAGTGGGAGCGGGTTTGACGGACATGCGTTTCCTCACCTATCTTTAAAAAGGGCTCGGTCGCCCGG AAAAAGAAACGCCAGCATAACCGCTTGTCGACGAACTTGCCGGAGCGTGCGCGCGAATGCAAATCGGCGTATGCGCAAAG GAAGACGGCGCGCGGCAAAGCGGCGGCCGGCGCGGCGTCAGTCGGCATACGGGCGGAGGCGGACCGCGCATATCGGGTTC GCGCCGGCCGTGCCGGCCGGCGTTGTCCGGCGCGCGTTTGCGCAACGGTTGAAACGAACGACCGCGGCGCGCCGGCCGAT CCGGCGCGCGCGTCTTCGTCCTCACGGCGCTCGGTTATCCGCCCGGTATCCGCTCTCCGCCGCCGAGCCGCCGCCGTGCG GTTTCCGTCGCTCGCCGTCCCTCGCCACCGCGCATCGACCTTCCCGCATCGGCGCCCGCGGCGAAATCGGCCGCCGCCAC GATCGCTGCGTCGGCCGCGCCGCCCGTACCCGAGGCGCGGCCATCGCCCCGCCGCTCAAGCCGCGCTCGCCGATACCCGC GCCGTCCCCCGGTTGA
Upstream 100 bases:
>100_bases ACGGCGCCCAGCGCGCCGCTTCGAGCACGGCGTGCAGATGCTCGGCGCTGACGGGCTCGCTCGAATACGCGCGCGGGCTC CAGCGGCCGGCGATCAGTTC
Downstream 100 bases:
>100_bases TCCGCAGCACGATCAGCGCGCCGGCGATGCACAGCCCGCCCGAAATCATCGACGCAACCGTATACGTGCCGAGGCTCGCG CGCAGCATGCCGGCGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRRRAAKRRPARRQSAYGRRRTAHIGF APAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLSARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRH DRCVGRAARTRGAAIAPPLKPRSPIPAPSPG
Sequences:
>Translated_191_residues MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRRRAAKRRPARRQSAYGRRRTAHIGF APAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLSARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRH DRCVGRAARTRGAAIAPPLKPRSPIPAPSPG >Mature_191_residues MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRRRAAKRRPARRQSAYGRRRTAHIGF APAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLSARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRH DRCVGRAARTRGAAIAPPLKPRSPIPAPSPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20998; Mature: 20998
Theoretical pI: Translated: 12.99; Mature: 12.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRRRAAK CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRPARRQSAYGRRRTAHIGFAPAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLS HCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRHDRCVGRAARTRGAAIAPPLK CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PRSPIPAPSPG CCCCCCCCCCC >Mature Secondary Structure MNRNGSGSGFDGHAFPHLSLKRARSPGKRNASITACRRTCRSVRANANRRMRKGRRRAAK CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRPARRQSAYGRRRTAHIGFAPAVPAGVVRRAFAQRLKRTTAARRPIRRARLRPHGARLS HCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ARYPLSAAEPPPCGFRRSPSLATAHRPSRIGARGEIGRRHDRCVGRAARTRGAAIAPPLK CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PRSPIPAPSPG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA