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The map label for this gene is 126454687

Identifier: 126454687

GI number: 126454687

Start: 3557659

End: 3558759

Strand: Reverse

Name: 126454687

Synonym: BURPS1106A_3655

Alternate gene names: NA

Gene position: 3558759-3557659 (Counterclockwise)

Preceding gene: 126453567

Following gene: 126451777

Centisome position: 89.23

GC content: 70.03

Gene sequence:

>1101_bases
ATGCAAACCGCGCAGCGGCGAATCGATCCTGGCGTAGTCGAGCGGCTGCTCGACGAGCCGCATCGCTTCGAGTTCTTTCA
GGCGGTGCGGCTGCTCGAGACCTGGTTCGCGAAGCACGATGCGCCGCGCCACGCGGCGAGCCGGCCGGGCGAGATCGTCG
CGCGGCGCATCGGCTTTCGCAATACGCTGTCGCTCGGCTTTCCGCCGAGCGAGATCGAGCGCGCGCAGTCGTACGACGCA
GCCGGCGCCGCGCTGAAGGACGACGTGCGGCGCAACGCGGCGCTCGAGGCGGGCGCGCTGTCGCGCGTCGAGCTCACGCC
GGCGTTCTTCGGGCTGCTGGGCGGCCAGGGCGCGCTGCCGCTGCATTACACCGAGCAGATCATCGCGCGTGAGCAACTGA
AGCGCGACCATGCCGCGCACGCGTTCTTCGATGTCTTCTCGAACCGCGCGACCGCGCTGTTCTATTCGGCATGGAAGAAG
TACCGTCTGCCGCTGCATTACGAACTCGACCGCGACGAGCGCTATCTGCCGCTCCTGCTCGCACTCGCGGGCGTGTCGAA
CGACGACGCGCGCTCGACCGTGCAGCAGGGCCGCGGCGCGCTGCTCGACGAGGCGATCGCGGGCTATGCGCTCGCCGCGC
GGCATCGGCCGGTATCGGCCGCGTATCTGCAGCGCACGCTGTCCGAATATTTTCGCGTGCCGATCCGCGTCGAGCAGTTC
GTCGGCAAGTGGTACGACGTGCCGCCCGATCAATTGAGCGTGCTCGGCGACGTGAACGTGACGCTCGGCGCGACGGCGCT
CGTCGGCGAGCGCGTGTGGCAGCGCGACATGCGCGCGCGGCTCGTCGTCGGCCCGCTGACGAAGCGCGACTACGAGGCGT
TCCTGCCCGGCGAGGAGCGCGCGATCGCGCTCGAGCGGATGCTGACGCTGCTCGCGGGCGTGACGCTCGAATACGAGGTG
TCGCTCGTGCTGCGCCGCGCGGAAGTCGGCGCGAGCGTGCTCGGCGCGGGCGCGCGGCTCGGCTGGGACGCGTTTCTCTG
CACGCGCGAAGCCGGGCGCGACCGTGCGGACGCGCGCTACGAGCTGCATGTCATTCATTGA

Upstream 100 bases:

>100_bases
TCGTGCGGATGATCGACGCGTTCTTCGGGCTGTACGTGCACCTCAACAGCTTTGTTCAACTGATCGTCGTGTCCAGGCGC
ACCGGCGAGGAGATCATGCG

Downstream 100 bases:

>100_bases
TAACAACGATCGAACCTGAGTGGACCGTCACCGATGAGCACGCCCCTGAAGACCCTGATCGCGAAACTGAACCCGGTGTG
CCGCAAGGCCACCGAGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKHDAPRHAASRPGEIVARRIGFRNTLSLGFPPSEIERAQSYDA
AGAALKDDVRRNAALEAGALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQLKRDHAAHAFFDVFSNRATALFYSAWKK
YRLPLHYELDRDERYLPLLLALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFRVPIRVEQF
VGKWYDVPPDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALERMLTLLAGVTLEYEV
SLVLRRAEVGASVLGAGARLGWDAFLCTREAGRDRADARYELHVIH

Sequences:

>Translated_366_residues
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKHDAPRHAASRPGEIVARRIGFRNTLSLGFPPSEIERAQSYDA
AGAALKDDVRRNAALEAGALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQLKRDHAAHAFFDVFSNRATALFYSAWKK
YRLPLHYELDRDERYLPLLLALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFRVPIRVEQF
VGKWYDVPPDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALERMLTLLAGVTLEYEV
SLVLRRAEVGASVLGAGARLGWDAFLCTREAGRDRADARYELHVIH
>Mature_366_residues
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKHDAPRHAASRPGEIVARRIGFRNTLSLGFPPSEIERAQSYDA
AGAALKDDVRRNAALEAGALSRVELTPAFFGLLGGQGALPLHYTEQIIAREQLKRDHAAHAFFDVFSNRATALFYSAWKK
YRLPLHYELDRDERYLPLLLALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFRVPIRVEQF
VGKWYDVPPDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEERAIALERMLTLLAGVTLEYEV
SLVLRRAEVGASVLGAGARLGWDAFLCTREAGRDRADARYELHVIH

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41028; Mature: 41028

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKHDAPRHAASRPGEIVARRIGFR
CCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHCCC
NTLSLGFPPSEIERAQSYDAAGAALKDDVRRNAALEAGALSRVELTPAFFGLLGGQGALP
CCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCCC
LHYTEQIIAREQLKRDHAAHAFFDVFSNRATALFYSAWKKYRLPLHYELDRDERYLPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
ALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFRVPIRVEQF
HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH
VGKWYDVPPDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEER
HHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCHH
AIALERMLTLLAGVTLEYEVSLVLRRAEVGASVLGAGARLGWDAFLCTREAGRDRADARY
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEE
ELHVIH
EEEEEC
>Mature Secondary Structure
MQTAQRRIDPGVVERLLDEPHRFEFFQAVRLLETWFAKHDAPRHAASRPGEIVARRIGFR
CCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHCCC
NTLSLGFPPSEIERAQSYDAAGAALKDDVRRNAALEAGALSRVELTPAFFGLLGGQGALP
CCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCCC
LHYTEQIIAREQLKRDHAAHAFFDVFSNRATALFYSAWKKYRLPLHYELDRDERYLPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
ALAGVSNDDARSTVQQGRGALLDEAIAGYALAARHRPVSAAYLQRTLSEYFRVPIRVEQF
HHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH
VGKWYDVPPDQLSVLGDVNVTLGATALVGERVWQRDMRARLVVGPLTKRDYEAFLPGEER
HHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCHH
AIALERMLTLLAGVTLEYEVSLVLRRAEVGASVLGAGARLGWDAFLCTREAGRDRADARY
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEE
ELHVIH
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA