| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454678
Identifier: 126454678
GI number: 126454678
Start: 1351292
End: 1351948
Strand: Reverse
Name: 126454678
Synonym: BURPS1106A_1378
Alternate gene names: NA
Gene position: 1351948-1351292 (Counterclockwise)
Preceding gene: 126453358
Following gene: 126454936
Centisome position: 33.9
GC content: 74.43
Gene sequence:
>657_bases ATGAACCACGCCGCCTCCTCCCTCCCGCACGCGCCGGATCCGCACCCGAAGCCGCGCGAGCGCGCGCCGTCGGCGCCGTG TCGCGACCGCGCCACGCCGGCGTCGACGCCGATCGCGCGTTTTTGCACACGGCTCGACGCCGCATTCGATTCGCTCCGCG ACGAGGCCGCGCCGTCGCGGCATCCGGCGTTCGCGCGAGCGCTGCGCGCCGCGCTCGCCGAGGCCGCCGCCGCACCGGGC CTCCTCACGCCCGCTCAGCGGGAGAGCGGCGCGGCGGGCTACCGCCGCCATCTGCTCGCCGCCGATCCGGCCGGCCGCTA TGCGGTCGTGTCGCTCGTCTGGGAGCCGGGCCAATGGAGCCCGGTTCACGGCCATCATGCATGGTGTGGCTACGCGGTGC TGGAAGGCAAGCTCACCGAGATCGTCTATCGCTGGAGCGACGCGGCCTGCTGCGCGATCGACGCGCGCAGACGCGCGCGG CCGATGGGCGCCGTGTCGTACGTGTGCGCGGGGCGTGACGCGATCCACCGGCTCGGCCACGCGGGCGCGAAAACCGATGC GCCCGCGATCTCGCTGCACGTGTACGGCGTCGCGGGCGAGCAGGTGGCGACGCACGTAAACGACGTCGTCGCGGTCGACG CGCGCGCGTACGCATGA
Upstream 100 bases:
>100_bases ATGAGGGAACAATATGGAATCCGTTTCTCCAAGTCGACCGGTATAAATACGTACCGAACCCGTGCAACGTCGCCGCGGGC CATGAACGACCGAGTCAACG
Downstream 100 bases:
>100_bases GCATGCCCGCCGACGCACGCGCGTGCGTCGCGATCAGCAACGGTTCGACGCGCCGGCGTTCGCGGCGTCACCCGAGCGAT CGGGTCCGGGCCTGTCCGCG
Product: putative cysteine dioxygenase, type I
Products: NA
Alternate protein names: Cysteine Dioxygenase Type I Family Protein; Metal-Dependent Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDEAAPSRHPAFARALRAALAEAAAAPG LLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWSPVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRAR PMGAVSYVCAGRDAIHRLGHAGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA
Sequences:
>Translated_218_residues MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDEAAPSRHPAFARALRAALAEAAAAPG LLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWSPVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRAR PMGAVSYVCAGRDAIHRLGHAGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA >Mature_218_residues MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDEAAPSRHPAFARALRAALAEAAAAPG LLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWSPVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRAR PMGAVSYVCAGRDAIHRLGHAGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA
Specific function: Unknown
COG id: COG5553
COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23140; Mature: 23140
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDEAAPSR CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC HPAFARALRAALAEAAAAPGLLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWS CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCC PVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRARPMGAVSYVCAGRDAIHRLGH CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHCCHHHHHHHHC AGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA CCCCCCCCEEEEEEEECCHHHHHHHHHHHEEECCHHCC >Mature Secondary Structure MNHAASSLPHAPDPHPKPRERAPSAPCRDRATPASTPIARFCTRLDAAFDSLRDEAAPSR CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC HPAFARALRAALAEAAAAPGLLTPAQRESGAAGYRRHLLAADPAGRYAVVSLVWEPGQWS CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCC PVHGHHAWCGYAVLEGKLTEIVYRWSDAACCAIDARRRARPMGAVSYVCAGRDAIHRLGH CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHCCHHHHHHHHC AGAKTDAPAISLHVYGVAGEQVATHVNDVVAVDARAYA CCCCCCCCEEEEEEEECCHHHHHHHHHHHEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA