Click here to switch to the map view.

The map label for this gene is 126454672

Identifier: 126454672

GI number: 126454672

Start: 1584506

End: 1585012

Strand: Direct

Name: 126454672

Synonym: BURPS1106A_1634

Alternate gene names: NA

Gene position: 1584506-1585012 (Clockwise)

Preceding gene: 126453021

Following gene: 126451789

Centisome position: 39.73

GC content: 73.37

Gene sequence:

>507_bases
GTGCTTTTCCTGCTGGGCGTCGCGGCGTGGCCGGCTGCCGGCCGGGCCGACACGCTGCTGCCCCGAACCCAGGCCTTCAC
GGTCAGCGCGCAGATCGTCGCGGGCTGCGGCGTCGCGGGCGGCGGGCCGGCGAGCGGCCTGAACTTCGGCACGCTCGACT
TCGGCGCGCATCCGGCCGTCGCGACGGGGCAGGTGAGCGCGGCCGTCGGCGGCGGCGCGTTGCAGATCGAATGTTCGCCG
GGCTCGACGTTGAAGATGACGATCGACGGCGGCGCGAACGCGAGCGCGGGCAACACGCAGCGCAATCTGGCGAGCGGCGG
CGCGCGCGTCGCATACCGGTTGTATTCGGACCCGGCGCGCACGCAGGCGATCGCGGTCGGGCAGGCGGTGTCGCTGCCCG
TGTCCGGCACGATCACGCTGCCGATCTACGGCGCGCTCACGCTGCCGGGCGGCGGCGCGCCCGCCGGCACGTATACCGAT
ACCGCGCAGGTCACGCTCAGTTATTAA

Upstream 100 bases:

>100_bases
TGGTAAGCGAGCGCGCCGTCCCGTTTGGCCTCGCGGCTCGCGCGCTAGCGGGCGGCGAGGCGGTCCCAGGTTTCCGATCG
TCATGTCGACCTTACAACGA

Downstream 100 bases:

>100_bases
TCAATCAGGAATCCGTGATGAAAGTTTCGAGATCGCCCGGCGCGCCGGCGCGCGCGGCAAGGGCGCTGCGCTGCGCGCTG
CTCGGCGCGGCCGCCGCCGC

Product: type I pilus protein

Products: NA

Alternate protein names: Type I Pilus Protein CsuB; Spore Coat Protein U Domain-Contain Protein; Spore Coat U; Type 1 Pili Subunit CsuA/B Protein; Fimbrial Protein

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAVATGQVSAAVGGGALQIECSP
GSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTD
TAQVTLSY

Sequences:

>Translated_168_residues
MLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAVATGQVSAAVGGGALQIECSP
GSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTD
TAQVTLSY
>Mature_168_residues
MLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAVATGQVSAAVGGGALQIECSP
GSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPARTQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTD
TAQVTLSY

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16365; Mature: 16365

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAV
CEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCE
ATGQVSAAVGGGALQIECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPAR
ECCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCCEEEEEEECCCCC
TQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTDTAQVTLSY
CEEEEECCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLFLLGVAAWPAAGRADTLLPRTQAFTVSAQIVAGCGVAGGGPASGLNFGTLDFGAHPAV
CEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCE
ATGQVSAAVGGGALQIECSPGSTLKMTIDGGANASAGNTQRNLASGGARVAYRLYSDPAR
ECCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCCEEEEEEECCCCC
TQAIAVGQAVSLPVSGTITLPIYGALTLPGGGAPAGTYTDTAQVTLSY
CEEEEECCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA