| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454653
Identifier: 126454653
GI number: 126454653
Start: 343739
End: 344572
Strand: Direct
Name: 126454653
Synonym: BURPS1106A_0377
Alternate gene names: NA
Gene position: 343739-344572 (Clockwise)
Preceding gene: 126453849
Following gene: 126454565
Centisome position: 8.62
GC content: 70.62
Gene sequence:
>834_bases ATGACGAACGCGGACGCGTGCGGGCACGCCGCCGCAGACCGCTGGGTCGACACCGGGCGCGGGCGTCTGTTCGCGCGATG CTGGCCCGCGCCGCATCGCGCGCACATGCCGGACGATGCGCCGCCCATCGTGCTGTTGCACGATTCGCTCGGCTGCGTGC GCATGTGGCGGACGTTTCCGCAGACGCTGGCCGCATGCGCCGGGCGGCGCGTGATCGCTTACGATCGCCTCGGCTTCGGG CAGTCGGATCCGCGCACGGACGCGCTCGGCTTCGATTTCGTGCGGGACGAGGCGCGCCGGTGCTTTCCGATGCTGCGCGA TGCGTTCGGCTTCGATCGCTTCGTCGCGTTCGGCCATAGCGTCGGCGGCGGAATGGCCGTGCATTGCGCGGCCGAGTTTG CTTCGGCGTGCGACGCGCTGATCACCGAATCCGCGCAGGCGTTCGTCGAAGACCGCACGCGCGCCGGCATCGTCGACGCG CGCGAGCAGTTCAAGCAGCGCGACGCGTTCGAACGGCTGCGCGCGTATCACGGCGAGAAGGCGCGCTGGGTGCTCGATGC ATGGATCGACACATGGTTGTCGCCGGAATTCGCCGGCTGGTCGCTCGCCGCCGTCCTGCCGCGCGTGACGTGCCCGACGC TCGCGATACACGGCGGCGACGACGAATACGGCTCGGCGCTGCATCCGGAGACGATCGCGCGGTTGGCAAGCGGGCCTGCG CAGATCGAAATCCTGCCGGGCGTACGGCACGTGCCGCACCGCGAGCGCGAGCAGTGGGTGGCGCAGCGGGTCGCTGCGTT CATCGGCGCGGGACCGCACGGCATCGCCGAATAG
Upstream 100 bases:
>100_bases CGCTCGGCATCACGCTGCTCGCCGCAACCCGCCTGTCGATCCTGCCGACCGTGATCATCGGCATCGTGTCGACCGGCGTG CTGCGCCATCTGCTCGGTCA
Downstream 100 bases:
>100_bases CGCGCGCGCCGCGGGCAGGCGGCTGGCCCGCATATTCGAGCATCGACGATCGACGAATCGGCAAATGCGCGGCCGCCGCG CACTATTCGGCGAGCTCGCG
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Lactonase; Hydrolase-Related Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Aryl-Ester Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Serine Hydrolase
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTNADACGHAAADRWVDTGRGRLFARCWPAPHRAHMPDDAPPIVLLHDSLGCVRMWRTFPQTLAACAGRRVIAYDRLGFG QSDPRTDALGFDFVRDEARRCFPMLRDAFGFDRFVAFGHSVGGGMAVHCAAEFASACDALITESAQAFVEDRTRAGIVDA REQFKQRDAFERLRAYHGEKARWVLDAWIDTWLSPEFAGWSLAAVLPRVTCPTLAIHGGDDEYGSALHPETIARLASGPA QIEILPGVRHVPHREREQWVAQRVAAFIGAGPHGIAE
Sequences:
>Translated_277_residues MTNADACGHAAADRWVDTGRGRLFARCWPAPHRAHMPDDAPPIVLLHDSLGCVRMWRTFPQTLAACAGRRVIAYDRLGFG QSDPRTDALGFDFVRDEARRCFPMLRDAFGFDRFVAFGHSVGGGMAVHCAAEFASACDALITESAQAFVEDRTRAGIVDA REQFKQRDAFERLRAYHGEKARWVLDAWIDTWLSPEFAGWSLAAVLPRVTCPTLAIHGGDDEYGSALHPETIARLASGPA QIEILPGVRHVPHREREQWVAQRVAAFIGAGPHGIAE >Mature_276_residues TNADACGHAAADRWVDTGRGRLFARCWPAPHRAHMPDDAPPIVLLHDSLGCVRMWRTFPQTLAACAGRRVIAYDRLGFGQ SDPRTDALGFDFVRDEARRCFPMLRDAFGFDRFVAFGHSVGGGMAVHCAAEFASACDALITESAQAFVEDRTRAGIVDAR EQFKQRDAFERLRAYHGEKARWVLDAWIDTWLSPEFAGWSLAAVLPRVTCPTLAIHGGDDEYGSALHPETIARLASGPAQ IEILPGVRHVPHREREQWVAQRVAAFIGAGPHGIAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30542; Mature: 30411
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADACGHAAADRWVDTGRGRLFARCWPAPHRAHMPDDAPPIVLLHDSLGCVRMWRTFP CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH QTLAACAGRRVIAYDRLGFGQSDPRTDALGFDFVRDEARRCFPMLRDAFGFDRFVAFGHS HHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC VGGGMAVHCAAEFASACDALITESAQAFVEDRTRAGIVDAREQFKQRDAFERLRAYHGEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC ARWVLDAWIDTWLSPEFAGWSLAAVLPRVTCPTLAIHGGDDEYGSALHPETIARLASGPA HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCC QIEILPGVRHVPHREREQWVAQRVAAFIGAGPHGIAE EEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TNADACGHAAADRWVDTGRGRLFARCWPAPHRAHMPDDAPPIVLLHDSLGCVRMWRTFP CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH QTLAACAGRRVIAYDRLGFGQSDPRTDALGFDFVRDEARRCFPMLRDAFGFDRFVAFGHS HHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC VGGGMAVHCAAEFASACDALITESAQAFVEDRTRAGIVDAREQFKQRDAFERLRAYHGEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC ARWVLDAWIDTWLSPEFAGWSLAAVLPRVTCPTLAIHGGDDEYGSALHPETIARLASGPA HHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCC QIEILPGVRHVPHREREQWVAQRVAAFIGAGPHGIAE EEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA