| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126454617
Identifier: 126454617
GI number: 126454617
Start: 309542
End: 309715
Strand: Direct
Name: 126454617
Synonym: BURPS1106A_0334
Alternate gene names: NA
Gene position: 309542-309715 (Clockwise)
Preceding gene: 126452203
Following gene: 126453453
Centisome position: 7.76
GC content: 77.59
Gene sequence:
>174_bases TTGCACGTGCCGGCCCGGCGCCGCCGGCGGGTTTGCCGCGCGATGCCCGCGCCGCGCGCGCCGCGCGCGCCTCGGCGCGT GACGCGGGCGTCGCGCAACGGGTGCCGCGCGGGCGGCGGCGCGATTCGCGGCGAAAAGTCGCTCGACGGCGCATGCGATG CACTATTGTTCTAG
Upstream 100 bases:
>100_bases CATCGCGATGGCGAAGCGCGTTCGCGCGGGCGACAGCGTGAGGGTGCGCGTCGAGAACGTCGACGGCGTGATGACCGTTG TGAAGCTCGAGAAATAGGCG
Downstream 100 bases:
>100_bases GTATCCGTGCCGCATCGCCGATAAAAGAAGCGTTGGCGCGCCCCGCGCCCCGTCCCGGCCGGCTGCCGTCGATTCATCGA TCAGGGAGGCGAAACATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MHVPARRRRRVCRAMPAPRAPRAPRRVTRASRNGCRAGGGAIRGEKSLDGACDALLF
Sequences:
>Translated_57_residues MHVPARRRRRVCRAMPAPRAPRAPRRVTRASRNGCRAGGGAIRGEKSLDGACDALLF >Mature_57_residues MHVPARRRRRVCRAMPAPRAPRAPRRVTRASRNGCRAGGGAIRGEKSLDGACDALLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6226; Mature: 6226
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVPARRRRRVCRAMPAPRAPRAPRRVTRASRNGCRAGGGAIRGEKSLDGACDALLF CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MHVPARRRRRVCRAMPAPRAPRAPRRVTRASRNGCRAGGGAIRGEKSLDGACDALLF CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA