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The map label for this gene is tse [H]

Identifier: 126454602

GI number: 126454602

Start: 481813

End: 483453

Strand: Direct

Name: tse [H]

Synonym: BURPS1106A_0520

Alternate gene names: 126454602

Gene position: 481813-483453 (Clockwise)

Preceding gene: 126454294

Following gene: 126453491

Centisome position: 12.08

GC content: 69.84

Gene sequence:

>1641_bases
ATGAACAGAATGAGCTTGAACCGCAAGCTGTGGCTGGCGCTTGCGCTCGTATGGGTCGGATTGCTGGGGGTTGGCGCTTG
GAGCGCGTTCGAGACGCGCACGACGATGCTCGCCGAACGCAAGGAAGGCATGGCGAATCTCGTCGATTCGGCGGCGGGCG
TCGTGAAGGCGTACTACGCGCTCGCGCAGAGCGGCAAGATGAGCGACGAGGACGCGCGGCGCGATGCGCTCGAGCGCCTC
GCGGCGATGCGCTACGGCGATTCCGGCTACTTGTTCGTGATGGATTCGAAGCCTGTCGTGCTGATGCATCCGACGCTGCC
GAAGCTCGTCGGCACGCAGGTCGGCGATTATCTGGACCCGGACGGCAAACGGCTGTTCGTCACGATCCTGAACGCGGCGA
AGGCGGGCGGGCACGGTTTCGCCGAGTACCGCGGGCGGCTGCCGCACAGCGAGACCGCGGTGCCGAAGATCAGCTACGTG
ACGCGCTTCGCGCCGTGGGACTGGAACATCTCGAGCGGCGTGTTCCTGAAGGACATCGATACCGTCTATTACGAGACGCT
CGTCGGCCATCTCGCGGTGGTGTTCGTGATCGGCCTCGTGATCACGGCGGCGATGCTCGTGATCATCCGCAACGTGCGCG
CGAGCCTCGGCGGCGAGCCGGACGAGGCGGCTTCGCTCGCCGCGCGGATCGCCGCGGGCGACCTGACGCGGCCCGTCGCG
GTGCGCGCGGGCGACGGCACGAGCATGATGGCCGCGATGCGCGACATGCAGGGCCGCCTGCGGTCGACGATCGGCGGCAT
CCGCCGGGCGGCCGAATCGATCGCGGCGGCGAGCCACGAGATCGCGTCGGGCAATCACGATCTGTCGCAGCGCACCGAGC
AGCAGGCCGCGTCGCTCGAAGAGACGGCGGCGAGCATGGAGGAGCTGACCGCGACCGTCAAGCAGAACGCCGAGAACGCG
CGGCAGGCGAGCGGGCTCGCGAACAACGCGTCCGAGATCGCGCTGAAGGGCAACGATGTCGTGAGCCGCGTGATCGGCAC
GATGGGCGAGATCAACGACAGTTCGCGGAAGATCGCCGACATCATCGGCGTGATCGACGGCATCGCGTTCCAGACCAACA
TCCTCGCGTTGAACGCGGCCGTCGAGGCGGCGCGCGCGGGCGAGCAGGGCCGCGGCTTCGCGGTGGTCGCGGGCGAGGTG
CGCTCGCTCGCGCAGCGCAGCGCGACGGCGGCCAAGGAGATCAAGCAGCTGATCGACGCGTCGGTCGAGCGCGTGAACAA
CGGCTCGGCGCTCGTCGGCCAGGCGGGCGAGACGATGACCGAGATCCTGCAGGCGGTGCGGCGCGTGACCGACATCATGG
GCGAGATCGCGGCCGCGTCCGAGGAGCAGTCGAGCGGGATTTCGCAGGTCGGCCGCGCGGTCACGCAGATGGACGAAATG
ACGCAGCAGAACGCGGCGCTCGTCGAGGAGGCGGCGGCGGCCGCGTCGTCGCTTCAGGAGCAGGCGGCGCGGCTGCGCGA
ATCGGTGAGCGCGTTCCAGGTCGGCGACGGCGCGGCCGCCGGTGCGGGCGCGGCGGCGGGCGTCGTCGGCGGGCCGAATG
CGGCTGCGTCGTCCGGCCGCGTCGAGCCGGCGCTCGCATGA

Upstream 100 bases:

>100_bases
AAGTTGTAAGCCGGCGTGCCGTAAATAGCGGCAGCGATCGTTCGCGGCCGGGGCCGCGGCGCGGACGGCGCGACGAACAC
GACACGGGAACGCACACACG

Downstream 100 bases:

>100_bases
CGCATGGCCATACCTATATGAGCGGGATGTATTTCACAGCCCCGCGATCTTGTGACACCATTTGCGCTTTCGTCAGCGCG
GCCCGGCCGGTCAGGCCGTC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MNRMSLNRKLWLALALVWVGLLGVGAWSAFETRTTMLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARRDALERL
AAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVGDYLDPDGKRLFVTILNAAKAGGHGFAEYRGRLPHSETAVPKISYV
TRFAPWDWNISSGVFLKDIDTVYYETLVGHLAVVFVIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVA
VRAGDGTSMMAAMRDMQGRLRSTIGGIRRAAESIAAASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENA
RQASGLANNASEIALKGNDVVSRVIGTMGEINDSSRKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RSLAQRSATAAKEIKQLIDASVERVNNGSALVGQAGETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEM
TQQNAALVEEAAAAASSLQEQAARLRESVSAFQVGDGAAAGAGAAAGVVGGPNAAASSGRVEPALA

Sequences:

>Translated_546_residues
MNRMSLNRKLWLALALVWVGLLGVGAWSAFETRTTMLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARRDALERL
AAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVGDYLDPDGKRLFVTILNAAKAGGHGFAEYRGRLPHSETAVPKISYV
TRFAPWDWNISSGVFLKDIDTVYYETLVGHLAVVFVIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVA
VRAGDGTSMMAAMRDMQGRLRSTIGGIRRAAESIAAASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENA
RQASGLANNASEIALKGNDVVSRVIGTMGEINDSSRKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RSLAQRSATAAKEIKQLIDASVERVNNGSALVGQAGETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEM
TQQNAALVEEAAAAASSLQEQAARLRESVSAFQVGDGAAAGAGAAAGVVGGPNAAASSGRVEPALA
>Mature_546_residues
MNRMSLNRKLWLALALVWVGLLGVGAWSAFETRTTMLAERKEGMANLVDSAAGVVKAYYALAQSGKMSDEDARRDALERL
AAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVGDYLDPDGKRLFVTILNAAKAGGHGFAEYRGRLPHSETAVPKISYV
TRFAPWDWNISSGVFLKDIDTVYYETLVGHLAVVFVIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVA
VRAGDGTSMMAAMRDMQGRLRSTIGGIRRAAESIAAASHEIASGNHDLSQRTEQQAASLEETAASMEELTATVKQNAENA
RQASGLANNASEIALKGNDVVSRVIGTMGEINDSSRKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEV
RSLAQRSATAAKEIKQLIDASVERVNNGSALVGQAGETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEM
TQQNAALVEEAAAAASSLQEQAARLRESVSAFQVGDGAAAGAGAAAGVVGGPNAAASSGRVEPALA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=322, Percent_Identity=62.4223602484472, Blast_Score=328, Evalue=8e-91,
Organism=Escherichia coli, GI1788194, Length=331, Percent_Identity=56.797583081571, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI1788195, Length=336, Percent_Identity=57.4404761904762, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1787690, Length=336, Percent_Identity=54.4642857142857, Blast_Score=298, Evalue=5e-82,
Organism=Escherichia coli, GI1789453, Length=254, Percent_Identity=44.4881889763779, Blast_Score=211, Evalue=8e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57139; Mature: 57139

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRMSLNRKLWLALALVWVGLLGVGAWSAFETRTTMLAERKEGMANLVDSAAGVVKAYYA
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQSGKMSDEDARRDALERLAAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVGDYLDP
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHCCCCCC
DGKRLFVTILNAAKAGGHGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDID
CCCEEEEHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCHHHHH
TVYYETLVGHLAVVFVIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE
VRAGDGTSMMAAMRDMQGRLRSTIGGIRRAAESIAAASHEIASGNHDLSQRTEQQAASLE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ETAASMEELTATVKQNAENARQASGLANNASEIALKGNDVVSRVIGTMGEINDSSRKIAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHH
IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLIDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SVERVNNGSALVGQAGETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEM
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHH
TQQNAALVEEAAAAASSLQEQAARLRESVSAFQVGDGAAAGAGAAAGVVGGPNAAASSGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VEPALA
CCCCCC
>Mature Secondary Structure
MNRMSLNRKLWLALALVWVGLLGVGAWSAFETRTTMLAERKEGMANLVDSAAGVVKAYYA
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQSGKMSDEDARRDALERLAAMRYGDSGYLFVMDSKPVVLMHPTLPKLVGTQVGDYLDP
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHHHHHCCCCCC
DGKRLFVTILNAAKAGGHGFAEYRGRLPHSETAVPKISYVTRFAPWDWNISSGVFLKDID
CCCEEEEHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCHHHHH
TVYYETLVGHLAVVFVIGLVITAAMLVIIRNVRASLGGEPDEAASLAARIAAGDLTRPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE
VRAGDGTSMMAAMRDMQGRLRSTIGGIRRAAESIAAASHEIASGNHDLSQRTEQQAASLE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ETAASMEELTATVKQNAENARQASGLANNASEIALKGNDVVSRVIGTMGEINDSSRKIAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHH
IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLIDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
SVERVNNGSALVGQAGETMTEILQAVRRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEM
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHH
TQQNAALVEEAAAAASSLQEQAARLRESVSAFQVGDGAAAGAGAAAGVVGGPNAAASSGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VEPALA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]