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The map label for this gene is yrbD [C]

Identifier: 126454511

GI number: 126454511

Start: 3643910

End: 3644470

Strand: Reverse

Name: yrbD [C]

Synonym: BURPS1106A_3733

Alternate gene names: 126454511

Gene position: 3644470-3643910 (Counterclockwise)

Preceding gene: 126451565

Following gene: 126451844

Centisome position: 91.38

GC content: 65.42

Gene sequence:

>561_bases
ATGACGATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTCTTCGTAGTGTTGGGCTTTCTCGCGTTGCTGTTCCTCGC
GCTGAAGGTCGGCAACATGAGCTCGCTGTCGTTTCAGCCGACTTACGCGGTGAAGATGAAATTCGACAACATCGGCGGCC
TGAAGCCGCGCGCGGCCGTCAAGAGCGCGGGCGTCGTGGTCGGGCGCGTGAAGACCATCGGCTTCGACACGAACACCTAC
CAGGCGCTCGTCACGATCGAGCTCGACAAGCAGTACCCGTTCCCGAAGGATTCGTCGGCGAAGATCCTGACCTCGGGTCT
GCTCGGCGAGCAGTACATCGGCCTCGATCCGGGCGGCGACACGGAAATGCTGAAGGCGGGCGATACGATCACGATGACGC
AGTCGGCGATCGTGCTCGAGAACCTGATCGGCCAGTTCCTGTACAGCAAGGCCGCGGACGCGGGCGGCGCGAAGCCGGGC
GCCGCCGCATCGGGCGCGCCGGCGCCCGCGCCGGTGGCGGCATCGGCGGCATCTGCGGCATCGGGCGCGGCGGCACAGTG
A

Upstream 100 bases:

>100_bases
GTCGCACGCGACGACCAAGACCGTCGTGTATGCGTCGCTCGCCGTACTCGGCCTCGATTTTCTGCTGACCGCGTTGATGT
TCAGCTAAGCCTTTTCTGGG

Downstream 100 bases:

>100_bases
ACGCCGCGCAAGCGGCATACGAGAGAAGAAAAGAGGGGAAGAACATCATGCAGACGATCCGCATCAGCCCAGCGGTGCTG
GCGATCACGGCCGCCGCGGC

Product: mce family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTY
QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPG
AAASGAPAPAPVAASAASAASGAAAQ

Sequences:

>Translated_186_residues
MTMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTY
QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPG
AAASGAPAPAPVAASAASAASGAAAQ
>Mature_185_residues
TMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTYQ
ALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPGA
AASGAPAPAPVAASAASAASGAAAQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=182, Percent_Identity=46.1538461538462, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 19094; Mature: 18963

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
KSAGVVVGRVKTIGFDTNTYQALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGD
HHCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
TEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPGAAASGAPAPAPVAASAASAA
HHEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
SGAAAQ
CCCCCC
>Mature Secondary Structure 
TMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
KSAGVVVGRVKTIGFDTNTYQALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGD
HHCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
TEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPGAAASGAPAPAPVAASAASAA
HHEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
SGAAAQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]